Colius striatus (speckled mousebird): 104556792
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Entry
104556792 CDS
T08355
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csti01002
]
104556792
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csti04121
]
104556792
Enzymes [BR:
csti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104556792
Peptidases and inhibitors [BR:
csti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104556792
Ubiquitin system [BR:
csti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104556792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
Vps23_core
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
104556792
NCBI-ProteinID:
XP_010199087
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
AFRGKHITLVVRFPNQGRQVEDLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGE
LVDPADDRKLIGQLNLKDKTLITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPN
PEVESCLPGVIMSLHPRYISFLWQVADLGSSLNMPPLRDGARVLMKLMPPDNTMVEKLRA
ICLDHAKLGESSLSPSLDSLFFGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLK
SGGLPLVLSMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVE
GTSTISPINQATHDQAVVLQNALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVI
RAVQKIVWASGCGSVQLVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALI
PTALDALSKEKAWQTFIIDLLLHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFT
VLGSTARERAKHSGDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGE
TGVEETILEGHLGVTKELLAFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMR
NGELPAEQAIPVCSSPATINAGFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEAL
TEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDM
SGDEKQDNESNVDPRDDVFGYPHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRL
QYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFA
DQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVD
TVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDD
VNPENQIIQNEQSENEHSGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKF
DDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTID
KDNELIKYISELAITTKPHQIKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCN
SVYLNPPPGQDHLLPEAEEITMISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRH
SKNVRFWFAHNVLFNVSNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASP
GPSSQAYDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLN
VPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLSNPYG
DPNLSQPIMALQQNVADILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSE
LLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHY
QKRAYQCIKCMVALFSNCPVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYN
NWSPPIQSNETSNGYFLERSHSARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYP
HSPGSQYQQNNHVHGQPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
5023 nt
NT seq
+upstream
nt +downstream
nt
agcttttcgtggtaaacatatcacactagtagttcgttttccaaaccaaggccgacaagt
ggaagatttggatatttggtctcacacaaacgacacaattggtcaagtacggcgttgtat
tctcaatcgtattaaagccaatagtgcacacacaaaagtagagctgttcattggtggtga
gctggtggaccctgcagatgacagaaaattaattgggcaattgaatctcaaagataaaac
gctaattacggctaagctgacacagataaattctaatatgccctcaagtcctgatagttc
ttctgactcttcaactggttctccgggcaaccatggcaatcactacagtgatggtccaaa
tccagaggttgaaagctgtttacctggagtgatcatgtcactgcatcctcgatacatctc
ttttctttggcaagttgcggacttgggcagtagcctaaatatgccacctcttagagatgg
agcacgtgttcttatgaagctcatgccaccagataacactatggttgagaaactgagagc
tatttgtttagatcatgcaaaacttggggaaagtagccttagtccatcccttgattctct
cttctttggtccttctgcctcacaagtgctgtatctcacagaggtagtctatgccttgtt
gatgcctgccagtgcacctctgggagaagatgccagtgacttccaatacaatttcttaaa
aagtggtggtttgcctcttgtattgagcatgctgaccagaaataactttctgccaaatgc
agatatggaaactcgaagaggtgcctaccttaacgctctaaaaatagctaaattattgct
aacagcaattggatatggccatgttcgagctgtggcagaagcttgtcagccagttgtgga
aggcacaagtacaatttcaccgataaaccaggctacgcatgatcaggcagtggtgctaca
aaatgccctacaaaacattcctaatccaacttctgaatgcatgctaagaaatgtagcaat
ccgtcttgcacagcaaatatctgatgaggcttcaaaatacatccctgatatctgtgttat
tagggcagtacaaaaaattgtttgggcatcaggctgtgggtcagttcagctggttttcag
ctcaaatgaagaaataagtaaaatctatgaaaagaccaatgcaggaaatgaaccagatgc
agaggatgaacaagtttgctgtgaagcattggaggtgatgaccctgtgttttgctttgat
tccaacggcactggatgcactcagtaaagaaaaggcatggcagacatttatcattgattt
gctattgcactgtcacagcaaaactgttcgtcagatggcacaggagcaattctttttaat
ggctaccaggtgttgcatgggacagagacctctccttttcttcattaccctgctgtttac
tgttctagggagtactgcaagagagcgagctaagcattctggagactacttcacactctt
aagacatcttcttaactatgcttacaacagtaatattaatgtacccaatgctgaagttct
tctcaataatgaaattgactggctgaagaggattagggatgaagtaaaaagaacagggga
aacaggtgtcgaagaaactatcttggagggtcaccttggagtaacaaaagagttgttagc
attccagacaccagagaagaaataccatattggttgtgaaaaaggaggtgctaatctcat
taaagagttgatagatgatttcatctttccagcatccaatgtttatctacaatacatgag
aaatggagaattgcctgctgagcaggccataccagtctgtagttcaccagctactattaa
tgctggctttgagctactagttgcactagcagttggatgtgtgcgaaatctcaaacagat
agtagacaccttgactgaaatgtattacataggtacagccatcactacttgtgaagcgct
tacagaatgggaatatctgccacctgttgggcctcgaccgccaaagggatttgtaggact
gaaaaatgctggtgccacttgttacatgaactctgtcattcagcagctgtacatgattcc
agccatcaggaacgggattctggcaattgaaggcacaggcagtgatgtagacgatgacat
gtctggggatgaaaagcaggacaatgagagcaatgttgacccacgagatgatgtatttgg
ttatccacatcagtatgaagacaaaccagcactgagtaaaacagaagacagaaaagagta
caatattggagttctgaggcatctccaagtaatttttggtcatttagcagcttccaggct
acagtactacgttccaagagggttttggaaacaatttagactttggggtgaacctgtaaa
tctgcgtgagcaacatgatgctttagaattttttaattccttggtggacagtttagatga
agctttaaaagctttgggccatccagcaatgttaagtaaagttttaggaggatcgtttgc
tgatcagaagatttgtcaaggatgcccacatcggtacgaatgtgaggaatccttcacaac
tctaaatgtagatataagaaatcaccaaaaccttcttgattctttggaacagtatgtcaa
aggagatttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggttga
tacagtgaaacgcttgttgattaagaagttgcctccagttcttgcaatccagttgaaacg
atttgattatgactgggaaagggaatgtgcaatcaagttcaatgattattttgaatttcc
acgagaactggacatggagccttacacagtggcaggtgtagctaaattggaaggagatga
tgtaaatcctgaaaatcagataatacaaaatgaacagtctgaaaatgaacactctgggag
cacaaaatacaggcttgttggtgtacttgtacacagtggccaggccagcggtggacatta
ttactcttacattatccagaggaatggtggagatggtgagaagaatcgatggtataaatt
tgatgacggagatgtgacagagtgtaaaatggacgatgatgaagaaatgaaaaatcagtg
ttttggaggagaatacatgggagaagtgtttgatcacatgatgaagcgcatgtcctacag
acgccagaagaggtggtggaacgcttacattcttttttatgaacgcatggacacaataga
caaagacaatgaactaataaaatatatttcagaacttgctatcaccactaaaccccatca
gattaaaatgccatcagccatcgaacgaagtgtacggaagcagaacgtgcagttcatgca
taatcgtatgcagtacagcttagaatatttccagttcataaagaagttgcttacttgtaa
cagtgtctacttaaatcctcctccaggacaagatcatctgttgcctgaagcagaagaaat
aactatgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaa
gaaaatagtccgtgggcctgctagtgactggtatgatgcattatgcatccttcttcgtca
cagcaagaatgtacgcttttggtttgcacacaacgtcctttttaatgtttcaaaccgctt
ctctgagtatcttctggagtgtcctagtgcagaagtgaggggtgcatttgcaaaacttat
agtatttattgcacatttttcattgcaagacggaccatgtccttcaccttttgcctctcc
tggaccttccagtcaggcgtatgataacttaagtttaagtgatcacttactgagagcggt
actaaatcttctaagaagggaagtatctgaacatgggcgccatttgcagcagtatttcaa
cctgtttgtgatgtatgccaatctaggtgtagcagagaagacacaacttctgaaactaaa
tgttccagcaacgttcatgcttgtggctctggatgaaggtccaggtccaccaattaaata
ccagtatgctgaactggggaagctatacactgtagtgtcacagctgatccgctgttgcaa
cgtgtcatcgcggatgcagtcctctatcaatggtaatcctccactttccaacccttacgg
tgatcctaatttatctcaacctataatggcacttcagcagaacgtagcagacattttgtt
tgtgagaactagttatgtgaagaaaattattgaagattgcagcaactctgaagagaccat
caagttgcttcgtttctgctgttgggagaaccctcagttctcttccactgtcctcagtga
acttctttggcaggttgcatattcctatacatacgaacttcgaccttacttggatctgct
tctgcaaatcctattaattgaggactcttggcaaactcacaggatccacaatgcacttaa
gggaatcccagacgacagggatggactatttgacaccattcagcgctcaaagaatcatta
tcagaaaagagcttaccagtgtataaagtgcatggtagctctcttcagcaactgtcctgt
agcctaccagatccttcagagcaacggagatctgaagagaaaatggacctgggcagtaga
atggcttggagatgagcttgagcgtagaccatacactggcaatccccagtacacctacaa
caattggtctccaccaatacagagcaatgaaacatcaaatggctacttcctagagagatc
acacagtgctaggatgactcttgcaaaagcttgtgaactctgtccagaggaggaaccaga
tgatcctgatgccccagatgaacacgagtcttctccacctgaagatgccccactgtatcc
ccattcacctggttcccagtatcagcagaataaccacgtgcatggacagccatatacagg
cccggcagcacatcatatgaacaaccctcagcgaactggccaacgagcacaagaaaacta
tgaaggcagtgaagaagtttccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
