KEGG   Colius striatus (speckled mousebird): 104556824
Entry
104556824         CDS       T08355                                 
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
csti  Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:csti00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:csti03037]
    104556824 (IFT140)
Cilium and associated proteins [BR:csti03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   104556824 (IFT140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR19_1st WD40_WDHD1_1st ANAPC4_WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR75_1st WD40 TPR_GEMI5 TPR_COPA_B WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Consortin_N WDR90_beta-prop_4th Beta-prop_Vps41 Clathrin EIF3I KNTC1_N TPR_IFT80_172 Beta-prop_TEP1_2nd
Other DBs
NCBI-GeneID: 104556824
NCBI-ProteinID: XP_010199135
LinkDB
Position
Unknown
AA seq 1411 aa
MAVYVDHRTEAPDSVASPALIAWHPLQPLLAVAALSTASGGCVDVYLEQGEHVSDAHVER
SFQVSSLSWHPSRSMLATGWETGEVVILNKQDKEQHAVPLSHSTKITALSWSINGTHLVS
GDKHGVLVLWRVDQRGRVQGPALLKQEYGKCLSHCVFRPPPPGEDFVQLAKAAVSGDEKA
LDMFNWRKAGTGAPLKMRLQEGLSFFITLTDGSVHYVNEKGKTRHVLSTDSLVQKLLFME
KRDVLLVITEKLQLSLHAITIEGEAEELMKVKLSGEIGHSADIILIDNSLVVTALGETVI
RFWDLDRNENYVLSPDVQFGFERGECINCVSYCSAKGLLAAGTNKGRIAMWKKASGFDQS
KRDLEGKEKWKLQAPTELEGNVTQIKWGSRKNLLAVNTISSVVILSEQTMLSHFHQQVAV
VQVSPNLFNVTVFSTGSTHSLCVDMNVNGVFATQDAVVFWNGKQVAVYESSEDTFRSAGS
FPCDSPVLAVHGENLYTVEPYRVQVRTLQGTVKQLLVFSEAEGSPCLLDVCGDFLAVGTD
LSHFRIFDLSRREAKVHWNSMNFSELFPGLGGIASVKCNANGNKVSILVSKEDGHVDSKI
CFYDVEMDEVTVFDFQAERGRGREKLSSGQGIAKSVVEYPDLHSHIPACHFWDQSEPRLF
VCEAILDTGLQSPDQKKNQTESTVDVWIVSFFSTQEHGLLLQDSFPLPSSYQLLLGIEVP
HYYFAKKLGEAENGQEESGSLRVPQMVARRPLRDFIGLGDCDKPTQDAMLNFSYYLTAGD
MDGAFKSIKLIKREAVWENMARMCVKTQRLDVARICLGNMGHARGAKALREAEQEPEQEA
RVAVLAIQLGMLTHHSYARHLEAAGERGLALAHYEKSDTHRFEVPRMLSEDLQALETYVN
KMKDKSLWKWWAQYLESQSDMDSALQYYTLAEDYFSLVRVLCFQGNIQKAAEIANETGNW
AASYHLARQYESQDQVKQAVHFYSRAQAYNNAIRLCKENNLDDQLMNLALLSSPEDMLEA
ACYYEEKGEQMDRAVMLYHKAGHFSKALELAFATQQFGALQLIAEELDEKSDPALLSRCS
DFFTQHAQYDKAVELLLAARRYHEALQLCLRQNLPITEDMAEKMTVGKDSPELSEESRRE
LLEQIADCCMRQGSYHMATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQREIYIMA
ANYLQSLDWQKEPEIMKNIISFYTKGKALDLLAGFCPGPAAVEIDEYENYEKAQGALAEA
YKCLSKAKPRNPVEQESKLAQLQSRMSLIKRFVQARRVYPEDPEEAVRQCELLLAEQDLE
SALRHGHVLGFLLAHYVQGQDFHTAHRYLEEMQRRIPPLNLSCYVPQQTIEAIHRGVGIP
LSQSLAPEQPQHSSMENKEVEEEVAEEVEEL
NT seq 4236 nt   +upstreamnt  +downstreamnt
atggctgtgtacgtggatcaccggacagaagcgcctgattccgttgcctcccctgcgctt
atagcgtggcacccgctccagccgctcctggccgttgctgcgctcagcacagcgtctggg
ggctgtgtggatgtctacttggaacagggagaacatgtgtctgatgcacatgttgagaga
agctttcaggtctcatccctgtcctggcacccttccagatcgatgctggcaacaggctgg
gagacaggagaagttgtgatactcaacaaacaagacaaggagcagcacgctgtgccactg
agtcacagcaccaaaattacagccctaagctggagtataaatggtacccaccttgtgtct
ggtgataagcatggtgtcttggttctgtggagagtggaccagcgaggcagagtgcagggt
cctgccctgctgaaacaggagtatggaaaatgtttgtctcactgtgtctttcgaccaccc
cctcccggcgaggactttgtacagctggcaaaagcagctgtgagtggtgatgagaaggcc
ttggatatgtttaactggagaaaagctggaacaggagcacccctgaaaatgagactccag
gaaggactctcattcttcatcactttgacagatggttctgtgcactatgtgaatgagaaa
ggaaagacaaggcatgtattgtccacagacagtctggtccaaaagcttctgttcatggag
aaaagagatgttttgcttgtaataacagagaagttgcagttgtccttgcatgccattact
attgagggagaggcagaagagctcatgaaggtgaagttgagtggggagataggtcactct
gcagacatcatcttaatagacaatagccttgttgttacagcactgggggagacagtcatc
aggttctgggatttggaccgaaatgagaactatgtgctctccccagatgtgcagtttggc
tttgagagaggagaatgtatcaactgtgtttcttactgcagtgctaaaggtctcttagca
gctggtaccaacaaagggagaatagcaatgtggaagaaggcatcaggatttgatcagagc
aaacgggatttggagggcaaggagaagtggaagctccaggcacctacagaacttgaagga
aatgtcactcagataaagtggggctcccgaaaaaacctcctggcagtcaacaccatcagc
tctgtggtgatcctcagtgagcagaccatgttgtctcacttccatcagcaagtggctgtc
gtacaggtgtctcccaacctgttcaacgtgaccgtcttcagcacaggaagcacgcacagc
ctttgcgttgatatgaacgttaacggagtctttgccactcaggacgctgtagtattctgg
aatgggaagcaagtcgctgtctatgagagctcagaagataccttcagaagtgcaggctcg
tttccttgtgactctccagttctggctgtgcacggagagaatctctacacagttgaaccc
tatcgggtccaggtccgcactttgcagggcacagttaaacagctgctggtgttctctgaa
gcagaggggagtccatgcctcctggatgtctgtggagatttcctggctgtgggaactgac
ttgtctcacttcagaatctttgatctctctcgcagagaggcaaaagtgcactggaatagc
atgaatttctctgagctgtttcctggccttggaggcattgcatctgtcaagtgcaatgct
aatggcaacaaagtcagcatccttgttagcaaggaggatgggcacgttgattctaagatc
tgtttctatgatgttgaaatggacgaagtcacagtctttgacttccaagctgaacgggga
agggggagagagaagctttcctctggccaaggcattgcaaagtctgttgtggagtatcca
gacttgcacagtcacatccctgcctgccatttctgggaccagagtgaaccaagacttttt
gtatgtgaagcaattcttgacacaggcctacagtccccagaccagaagaaaaaccagact
gagagcacagtggatgtttggatcgtatcgttcttcagtactcaagagcacggccttttg
cttcaggacagctttccactgccttcatcttaccagcttcttttgggcatagaggtgcca
cattattactttgcaaaaaagctgggagaagctgagaatggacaagaagagtctggctca
cttagggtgcctcagatggttgcgagaagacccctgagagatttcattggattgggagac
tgtgataagcccacccaggatgccatgctgaacttcagctactatttgactgctggggac
atggatggagccttcaaatccatcaagctgataaaaagagaggctgtctgggagaacatg
gctcgcatgtgtgtgaagacccagcggctggacgttgccaggatctgcctggggaacatg
ggccacgccaggggagccaaggccctgcgggaggccgagcaggagccggagcaggaggcc
agggtggctgtgctggccattcagctgggcatgctgacccaccacagctacgctcggcac
ctggaggcggccggcgagcggggcctggcgctggcacactatgagaagtctgacacacac
aggttcgaggtgccccggatgctctctgaagacctacaagccctggagacctacgtcaac
aagatgaaagacaagagcctgtggaagtggtgggcacagtacctggagagccagtccgac
atggactctgccctccagtactacaccctggctgaggattacttctccctggtccgtgtg
ctctgcttccagggcaacattcagaaggctgccgaaatagccaacgagacgggcaactgg
gcagcgtcgtatcacctggcccgtcagtacgagagccaggaccaggtgaagcaggctgtg
cacttctacagccgggcacaggcctacaacaacgccatccgcctgtgcaaggagaacaat
ttagatgatcagctgatgaacctggctcttctgagctcgccagaagacatgctagaggca
gcctgctactacgaggaaaagggggagcagatggacagagctgtcatgttgtaccacaag
gcaggacacttctccaaagctctggagcttgcctttgccacacagcagtttggggcctta
cagctgattgctgaagagctggatgagaaatcagacccagctctgctcagccgctgctca
gatttcttcacgcagcacgctcagtacgacaaggctgtggagctgctgctggcagcacgg
cggtaccacgaagctctgcagctgtgcctgaggcagaacctgcccatcacagaggacatg
gctgagaagatgacggtggggaaggactcgcctgagctgtccgaggagtctcggcgagag
ctgctggagcaaattgctgattgctgcatgagacaaggcagctaccacatggccaccaag
aaatacacacaggcaggaaacaagctaaaggctatgagggcgctgctgaaatccggcgac
accgagaaaatcgtcttctttgccggggtgtccagacagagggagatttacatcatggca
gccaactacctccagtcactggactggcagaaggagcctgagattatgaagaacatcatc
agcttctacaccaaaggaaaggccctggacctgctggcaggtttctgcccaggtccggcc
gctgtggaaattgatgagtatgagaactatgagaaggcccaaggagcgctggcagaagct
tacaagtgtctttcaaaagcaaagcccagaaaccccgtggaacaggagagcaaactggcc
cagctgcagagcaggatgagcctcatcaagcgcttcgtccaggctcggagagtttaccct
gaggaccccgaggaagcagtgagacagtgtgaactgctcctggctgagcaggacttggag
agtgccctgcgccacggccatgtcctgggcttcctgctggcacactatgtccaagggcag
gacttccacacggctcaccgctacctggaggagatgcagaggaggatcccacccctgaac
ctgagctgctacgtgcctcagcagaccatcgaggccattcaccgaggtgtgggcatcccc
ctgagccagagcctggctccagagcagcctcagcacagcagcatggagaacaaggaggta
gaggaagaagtggctgaagaagtggaggagctgtga

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