Colius striatus (speckled mousebird): 104557120
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Entry
104557120 CDS
T08355
Symbol
PDZD2
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 2
KO
K24058
PDZ domain-containing protein 2
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csti04990
]
104557120 (PDZD2)
Domain-containing proteins not elsewhere classified [BR:
csti04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
104557120 (PDZD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104557120
NCBI-ProteinID:
XP_010199534
LinkDB
All DBs
Position
Unknown
AA seq
2505 aa
AA seq
DB search
YLAEQCWNGGFVYLIMLRRIKRKAPLPPSNGNNSNSCDPKAKPSPEPSDRAAQNGKRTRK
FGVITRTPGSKDGKEKPGSEHGNGHCTPMEVEVAQPETSEAEHNGEEQLQGTGGQYRCRL
SDGGVPDMGDQSAQREGCRMWKMHILKGTDGLGIQITGGRGSKRSPHSIIVTHVEEGGLA
HRDGRLTVGDELLMINGQSLVGLSHQDAVALLRSAAGLVQLVVASKESAEGDFLKYSSTS
LPDLLSTCSVQDSISCTDNKENEEPEEEEDVKGLNVSPEKLVAVMETEKSQNPVCAEVSK
GNNQSPTLGSGILKYRSRSQGTASRLESVGEDDELTVENGESSYEIAVKYSRGGRKHSLP
QQLESAGARQDYHIVKKSTRSFSAAQVESPWRLTQPSIISNIVLMKGQGKGLGFSIVGGQ
DSARGRMGIFVKTIFPNGAAAADGRLKEGDEILEVNGESLQGLTHQEAIHRFKQLKKGVV
TLTVRTRLRSPSLTPCATPTLLSRSSSPSSGASGATLPGPDEPDGSSSNRKGPGPKDRIV
MDVTLNKEPGVGLGIGACCLTLENSSPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSL
RHAALSEAYAILSECGPGPVSLIISRHPNPKVSEQEMDEAIARTTHRESKDASSSHITGA
VQKSPSPSAKAKQGETSSPLSWTMKRFLEPASRGSVSSEAELSQYFSHDGTSQFPFADAV
TSSCDEEQLRQKNRNSLLDDGSPLPGSLTAREAGAAKANGLASPTSGRSPGLHNKHVESV
RPGILSDSPKSNRSPFHRQRRVVFYDGDISDDDEGSHLQRSLRAKSQEDAGIVITTSSVE
IDDESQDSESPRYSGRETSSPVFSNSAESAEQIDSPFFPIIAFDYSSVPEVRLGSLSLKE
LREAQLESKRSPKLEHRAVTRVKSMMSTECRSLQRQRTEEHGSYNKPVARMLPHSKKCEA
PDGAGQGQGEIVTLVRSEHESFGLDLEIQAMPLKVVVTGLRPGGAAEMGSMGKMAVGDEI
TTINSIPVSKMMYEEICLLMQCLPTSVTLEIQKATSAVSRFTNLILSPGVECQNQAGINS
MVATDEEQSTGKREGAGLQNACAVERTTLPPDATSKDVQRVTVASSLSEDCPAAPVTDID
DLLSQMGAAESRASRTPSRAESPLRDEYTTMCCCGTDEGCPGSEPQPAKEELQEKTVNCG
ANAQGVLGLSVLDSINTGKLFTVNKNSLNNYSRNFSSLNEDELPAANSVEGKRSDVFPKS
MYGAAEDSHSDTESVTEGCDGANEMLLGPCTAAANASVACAVMESDEEQIEICCMSNELQ
KPAQEQHLTSATSSSLSPLHCYGGKVLQMEGCAMCESLETSINKLDLEDHGGPTTPCPSQ
CSDVSSASLYSPSSVFVLEKDIQKNSDSIPEVYSFCNNGALSMEQQMGLGNSDGDMKCCG
SIEEGSLHCKKISFCSARNTSCLESNLLEKEGCCDEQRSRSESETVADGCNHAVSYCLVK
KETNSLSSLSKTDSNHVNASLSRAISLRSPFPTRSKDPKANTAHDLPGKNEKINSVTSGR
TSNGKVQSSGANHCKGGAVPHSPSSQKKSCQDSKGMAQKSIMDTLLNNQKAKSGPKLKGF
TIKSKAKANTDCSGVNSTKVSGADQKRASVSPQLSPKPLGKKTPLSRNSPTNPDPGKSIP
AVSRTLKSELETKPSLVISDDSVLSFQNGSSSPTASSEMKCSCGEATDLQQAWGKPKEKQ
ISMLPALCQSKGAKVDDFRDRNGQSKVTSSSQGIPKTEFVKGKTENPGTGLNASNSICSA
DHLRQLDFKNMGPSVGQDQPEGQEIQRTFIEVKLSSSSSSSSSSASSSPASFLQLPLLEK
TEEANTEVPRLSDEMGTTQYFSKVDAAGDRSLYGLSKPVTRTYSMPAQLSGQLREDCQVA
ELHPVQGPQGHTAEEKYPQAATGTLKMVHLNLPNGQSGKEQAYASRSTQRVHDMSSSASD
ISCPATAKLRSFRRNYYYYELNWAHEPASSFSVKQRIKSFENLANFDRPIVKAIDIHSAM
RSPLTRRSCGAMATTHSPAETPRALRRSFSSYGGSPSTTSAMAKSPSNAEATRLAEGNKG
EGKPQRSEEGGAGADLAAVPPSASQARTARGPGGRPLXXXXLRALSMPDLDKLCGEGFSG
PPQPACFKTELEITPRRALGMPAGSSAAPPACCDPAEAGRMGMVASSPRDSGSGTPGSAS
DDDVPHSNSPHGEHWENSWSISLDQLLVSSLDQQKLQSVLSAVVPKCDVAVMLQEIKAQG
KSKEETYFVVLHKEEGAGLGFSVAGGIDLEQKSVTVHRVFSKGVASQEGTICRGDLVLSI
NGTSLASSVHGDVLNTLHQARLYKYAVVVIRKEKDKANNSSRPEISATGRKCVGSGKDVS
MEIGTDPNLDMSDVICVELLKTSAGLGFSLDGGKASIAGDRPLLVKRIFKGGAAEQSGNI
ETGDEILAVSGKSLLGLMHYDAWNIIKSVPEGPVQLLIRKHRTSV
NT seq
7519 nt
NT seq
+upstream
nt +downstream
nt
ttacctggctgagcagtgctggaatggcggctttgtctacctgatcatgttgcgccgcat
caagcgtaaagcccctcttcctccctccaacggcaacaacagcaacagctgcgacccaaa
ggccaaacccagccctgaacccagcgacagagctgctcaaaatgggaaaaggacacggaa
gtttggcgtcatcaccagaacaccgggcagcaaggatggcaaagaaaagccaggctcaga
gcacgggaatgggcattgcaccccgatggaggttgaggtagctcagccagagacctccga
agcagaacacaacggggaagagcagcttcagggcactgggggacagtaccgatgccggct
gtcagatggaggtgtgccagacatgggtgaccagtctgcacagcgagaaggttgccgcat
gtggaagatgcacatcctgaaggggacggatggactgggaatccagataacgggaggcag
agggtcgaagcggtcccctcacagcatcatcgtcacccacgtggaggaaggcggcttggc
gcacagggacggcaggctgacagtgggcgacgagctcctcatgatcaacgggcagtcact
ggttgggctctcccaccaggacgctgtggctctgcttcgctcggctgccggcctggtgca
gctagtggttgctagcaaggaatctgctgaaggggattttctgaagtactcatctaccag
tttgccagacttgcttagcacttgttcagtccaagactctatctcttgcactgacaataa
ggaaaatgaagagccagaagaagaagaagatgtgaaaggattgaatgtgtctcccgaaaa
actggttgctgtgatggaaactgagaagtctcaaaatccagtttgtgcagaagtgtccaa
aggaaacaaccagagtccaactctgggaagtggcatactgaaatacagaagtcgatccca
aggtactgcatcccgcttggagtctgttggagaagacgatgagctcacagtggaaaatgg
tgaatcaagttacgaaatagcagtgaaatactcccggggtgggagaaagcactctctgcc
ccagcagctggagtcagcaggagccaggcaggactaccatattgtgaagaaatccacccg
ttccttcagtgctgcccaagtagaatcaccatggagactgacccagccgtccatcatttc
caacattgtcctgatgaaagggcaaggcaagggtcttggattcagcattgtgggaggtca
ggattctgctcgtggacgcatggggattttcgtgaagactatattcccaaatggtgcggc
ggctgctgatggaaggctgaaagaaggggatgaaatcctagaagttaatggagagtctct
acaagggctgacccatcaggaggctattcacaggtttaagcaactgaagaaaggcgtggt
gacactgacggtgcgcacgcggctgcgcagcccgagcctcacgccctgcgcgactcccac
cttgctgagccgctccagctcccccagctcaggtgccagtggtgcgacactccccggccc
cgacgagccggatggctcctcctccaaccgcaaaggccctggcccgaaggacagaattgt
catggatgtgacgctcaataaagagccgggggttgggcttggcattggtgcctgttgtct
tacgctggaaaacagttctccggggatatacattcacagcctggccccaggatcagtggc
taaaatggatggcaggttaagccggggtgaccagatcctggaggcagattcagtgagtct
gcgtcacgcagcgttaagtgaagcctacgccatcctgagcgagtgtggtccaggccctgt
cagcctcatcattagtcgacatcctaacccaaaggtttctgagcaggagatggatgaagc
aatcgcacgtactacccaccgagagagcaaggatgccagctcttctcacatcacaggagc
tgtacaaaaaagtccgtctcccagtgcgaaggccaaacaaggagagacctcatctcccct
cagctggactatgaaacgcttcctggagccagcaagccggggatctgtcagctccgaggc
agagctttcccagtacttctctcatgacggtacaagtcagttcccctttgctgatgctgt
aaccagctcctgtgacgaagaacagctccgccagaagaacagaaacagtttgctggatga
tggctctcctcttcctggcagcctgactgctagagaagcaggagcagcaaaagcaaatgg
tctggcttcacctactagtgggagatcacctggtcttcacaacaaacatgtggagtctgt
ccgacctggcatcctcagcgacagtcccaaatctaaccgcagtccctttcaccgacagag
gagggttgttttctatgatggtgacattagtgacgacgatgaaggttcccatttgcagag
gagcttgagggccaagagccaggaggatgctggcattgtcattacaacctcgtctgtaga
aattgatgatgagagccaggacagtgaatcaccaagatatagtggcagagagacttcttc
ccctgtcttcagcaactctgcagagtctgcggagcaaattgactctcccttcttcccaat
catagcattcgattactcaagtgtgcctgaagttcgtcttggcagcctgagtttgaagga
gctccgggaagcacaacttgaatcaaagagatctccaaaacttgagcacagagcagtcac
cagagtgaaaagcatgatgagcactgagtgccgaagccttcagagacagaggacagagga
gcatggctcttacaacaagcctgttgcgagaatgctccctcacagcaaaaagtgtgaagc
acctgatggggctgggcagggccagggtgaaatagtcactctggttcgcagtgagcatga
gtcattcggcctggatttggaaatacaggccatgcccttaaaagttgttgtcacaggact
gcggccaggtggagcagcagaaatgggatcaatgggcaagatggctgtaggagacgagat
taccaccatcaacagtatcccagtcagtaagatgatgtatgaggaaatctgcttgcttat
gcagtgtcttcccacatctgtaaccctggagatccagaaagcaacatcagctgtcagcag
atttacaaacctcatcctgtctccaggggtagagtgtcaaaatcaggccggtatcaacag
catggttgcaaccgatgaagaacagagcacggggaagagagaaggagcaggtctgcagaa
tgcttgtgcggtggagaggacaacactgccacctgatgccaccagcaaagacgtgcagag
agttaccgtggcaagcagcctctctgaggactgccctgccgcccctgtcactgatatcga
tgacttgctcagccagatgggtgctgccgagagcagggcttcacgcaccccgtcgcgagc
agaaagccccctccgagatgagtacaccaccatgtgctgctgtggaactgatgaagggtg
tcccggatctgagccacagccagccaaggaggagctgcaggaaaaaactgtgaattgtgg
agctaatgcacaaggagttttagggctgtctgtgttggactctattaacacaggcaaact
ttttactgtgaataaaaactctttaaataactactccaggaattttagcagcttaaatga
ggatgagttgcctgcagcaaactctgtggaagggaagaggagcgacgtgtttccaaagtc
tatgtatggggctgcagaggattctcattcagacacagagtccgtcacggaaggctgtga
tggtgcaaatgagatgttgcttgggccctgcactgctgctgctaatgcctctgtggcctg
tgctgtaatggagtcagatgaagagcaaattgagatctgttgcatgagcaatgagttgca
gaagcctgcacaggagcagcatctcacatctgccacaagctcctctctgtccccactgca
ctgttacggtggcaaagttttgcagatggagggctgtgcaatgtgtgagtcactggagac
aagtatcaacaaactagacttggaagatcacggtggtcccactactccgtgtccatcgca
gtgttcagatgtgtcctcagcatccttgtattctccttcctcagtttttgtgctagaaaa
agacatccaaaagaattcagacagcatccctgaagtttactctttctgtaacaatggtgc
cttaagtatggaacaacagatgggtttgggaaacagtgatggagatatgaagtgctgtgg
atccattgaagaagggtctctgcactgcaaaaagataagcttttgctctgctagaaatac
cagttgcttggagagcaacttgcttgagaaagaaggatgttgtgatgagcagagatccag
atctgaaagtgaaacggtggctgatggctgtaatcatgctgttagttattgcttagtgaa
gaaagaaaccaacagtttgtctagcttgtctaaaacagacagcaatcatgtgaatgcatc
attatcaagagcaatatcactcaggtctccctttcccactagatctaaagatccaaaggc
taatacagctcatgacttgccagggaaaaatgagaaaattaactctgtgacttcaggaag
gacttcaaatggaaaagtccaaagctcaggcgcaaatcactgcaaaggaggtgcagtacc
gcacagcccatcctcacagaaaaagtcctgtcaggactctaagggaatggcacaaaaaag
tataatggacacccttttaaataaccagaaggccaaatcaggaccaaagctaaaaggatt
caccatcaaaagcaaagcaaaggcaaatacggattgttctggtgttaattctaccaaagt
cagcggggcagatcagaaaagggcttccgtttctccacaattgtcccccaaacctctagg
caagaaaacaccgttgtcccgtaattcacctacaaacccagatcctggcaagagcattcc
agcagtctcaaggactctgaagtcagagctagaaactaaaccatctctagtcatttctga
tgattcagttctgtctttccagaatggcagcagcagcccaacagcgagcagcgaaatgaa
atgcagctgtggggaggcaacagatttgcagcaggcatggggaaagccaaaagaaaagca
aatttccatgctgcctgcactgtgtcagagtaagggtgctaaggtggatgatttcagaga
cagaaatggtcagtccaaagtcacttcatcttcccagggcataccaaaaaccgaatttgt
aaaagggaagactgagaaccctggaacaggcctgaatgcaagcaacagcatctgtagtgc
agatcatcttaggcaattagatttcaaaaacatgggaccatctgtaggacaggatcagcc
ggaaggacaggagatccagcgcactttcatagaggtgaagctctcctcctcatcatcttc
ctcctcatcctctgcctcttcttctccagcatcatttttgcagctgccattgctggagaa
gacagaagaggcgaacacagaagtgcctcgactgagtgatgaaatggggaccacgcagta
tttttcaaaagtggatgctgctggagacagaagtctctatggcttgtcaaaacctgtgac
aaggacttactcaatgccagcccagttgtcaggtcagttgagggaggactgccaagttgc
agagcttcatcctgtacaaggaccccagggccacactgcagaggagaaatacccccaggc
agcaacagggacgttaaagatggtccatctgaatttgccaaatggccagagtgggaagga
gcaggcgtatgcttccagaagcacccagagggtccatgacatgtcctcctcagccagtga
cattagctgccctgccaccgctaagctgaggagcttcaggaggaattactactactatga
gctgaactgggctcatgaacctgcctcatccttctctgtcaaacagaggatcaaatcttt
tgaaaacctggcaaattttgaccgacctattgtgaaggccattgatatacattcagccat
gaggtctccccttaccaggaggtcgtgcggtgcaatggccaccacacacagccctgctga
gacaccacgggccttgcggcgcagcttcagctcctatggcggcagccccagcacaaccag
tgccatggccaagtctcccagcaatgcagaggccacacgtctggcagagggcaacaaggg
ggaaggaaagccccagaggagtgaagaaggtggtgctggggcagatctggctgccgttcc
tccctcggcctcacaggcacgcaccgcccggggccccggcgggcgccccctnnnnnnnnn
nnnnctgagggccctcagcatgcctgacctggacaagctgtgtggagagggcttctcagg
gcctccacagcccgcctgcttcaagacagagctggaaatcacaccccgcagagccctcgg
catgcctgccgggagcagcgcagccccaccagcctgctgtgaccctgctgaggcaggcag
gatgggaatggtggccagcagccctcgggacagcggctcagggacaccagggtctgcatc
agatgatgatgtgccccacagcaactctccgcatggagagcactgggaaaacagctggtc
catcagcttggatcagctgctcgtctcaagcctggaccagcaaaaactgcaatctgtttt
gtcagcagtagtaccaaaatgtgatgttgctgtgatgctccaagaaatcaaagcacaagg
aaagagcaaggaagagacatactttgtagtcttacacaaagaagaaggagctggcctggg
atttagtgttgctggaggaatagatctggaacagaaatcagtcacagtccacagagtgtt
ttcaaagggagtggcatctcaagaagggactatttgtcgaggagatcttgttctgtcaat
caatggcacgtctcttgcgagctcagtccatggcgatgttctgaacactcttcatcaggc
aagactgtacaaatacgcggtcgttgtcatccgaaaggagaaagacaaagcaaataattc
ctccagacctgagatatcagctactggcagaaaatgtgtggggtctggaaaggatgtttc
catggaaataggaacagatccaaacctggatatgagtgatgtcatctgtgttgaattatt
gaaaacctctgctggcttgggatttagcctggatggtggaaaagcttccattgctggaga
caggcctttgcttgtaaaaagaatatttaaaggtggtgctgcagagcaatctggaaacat
agaaactggagatgaaattcttgctgttagtggaaagtcattacttggcctcatgcatta
cgatgcctggaacattattaagtctgtgccagagggccccgttcagttactaatcagaaa
acacagaacttcagtgtga
DBGET
integrated database retrieval system
