Colius striatus (speckled mousebird): 104557210
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Entry
104557210 CDS
T08355
Symbol
CDK5RAP1
Name
(RefSeq) CDK5 regulatory subunit-associated protein 1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csti03016
]
104557210 (CDK5RAP1)
Enzymes [BR:
csti01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
104557210 (CDK5RAP1)
Transfer RNA biogenesis [BR:
csti03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
104557210 (CDK5RAP1)
Prokaryotic type
Methylthiotransferases
104557210 (CDK5RAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
104557210
NCBI-ProteinID:
XP_010199649
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MNVNDTEIAWAILQRNGYSRTKEVDEADVILLVTCSVREKAEQAVWNRLQHLKALKARRQ
RAGSALRIGILGCMAERLKEEILHREKLVDVVAGPAGQQAANVLLSLEETYADILPVQTS
AGGTTAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILQEVRMLSDQGVKEVTLLGQNV
NSFRDTSEVQFQPAAAPALSRGFSTVYKAKAGGLRFAHLLDQVSRIDPEMRIRFTSPHPK
DFPDEVLQLIQERHNICKQLHLPAQSGSTRVLEAMRRGYTREAYLELVQHVRESIPGVSL
SSDFITGFCGETEDDHQQTVALLREVRYNVGFLFAYSMRQKTRAHHRLQDDVPPETKRRR
LQELIAVFREEAARANEAMVGQSQLVLVEGPSRRSASELCGRNDGNIKVIFPDTEAAAGG
GAPARARPGDYVLVKVTSASSQTLRGDLLCRTTLSRSTLAH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaacgacacggagatcgcctgggccatcctgcagaggaatggctacagcagg
acaaaggaggtggatgaggcagatgtgattctcctcgtcacctgttctgtgagggagaag
gcagagcaggctgtgtggaaccggctgcagcacctgaaggccctgaaggcgcggcggcag
cgggctggctcagcactgcgcatcggcatcctgggctgcatggctgagaggctgaaggag
gagattctgcacagggagaagctggtggatgtcgtggcaggcccggctggccagcaagct
gccaacgtcctgctctcactcgaggagacctatgcagatattctgcctgtccagactagt
gcaggtggcacaacagcctttgtgtctatcatgaggggctgtgacaacatgtgcagctac
tgcatcgtgcccttcacccgcggccgcgagcggagccggcccatcgcctccatcctgcag
gaagtgaggatgctgtcagatcagggagtgaaagaagtgacccttttgggtcagaacgtc
aacagctttcgggacacgtccgaggtgcagtttcagccggctgctgcccccgccctcagc
cgtggctttagcacggtctacaaagccaaagcaggaggcctgcgcttcgcacatctgctg
gaccaggtttctaggattgatccggaaatgaggatccgtttcacctctccacaccccaag
gatttccctgacgaggtcctgcagcttatccaggagcgacacaacatctgcaaacagctt
cacctcccggcccagagtgggagcacacgggtgctggaggccatgcggcgaggatacacc
agagaagcctatttagagcttgtgcagcatgtgcgtgagtccattccaggagtgagcttg
agcagtgatttcatcactggcttctgtggagagacagaggatgatcaccagcagaccgtg
gccttgctgcgggaggtccgctacaacgtgggcttcctgtttgcctacagcatgaggcag
aaaacccgggcccaccaccgcctgcaagacgacgtgcccccagagacgaagaggcggcgg
ctgcaggagctcattgctgtgttccgagaggaggctgcaagggccaatgaggccatggtg
ggccagtctcagctggtgctggtggaggggcccagcaggcgctctgcctctgagctgtgt
gggaggaatgatggcaacatcaaggtgatcttccctgacaccgaggcggctgcgggcggc
ggggccccggccagagcccggcctggcgactacgtcctggtgaaggtgacctctgccagc
tcgcagaccctgaggggagatctgctctgtcggacgaccctgtcccgctccactctggct
cactga
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