KEGG   Colius striatus (speckled mousebird): 104557533
Entry
104557533         CDS       T08355                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
csti  Colius striatus (speckled mousebird)
Pathway
csti03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104557533 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csti03019]
    104557533 (EXOSC1)
Messenger RNA biogenesis [BR:csti03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104557533 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104557533 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 RRP4_S1 S1
Other DBs
NCBI-GeneID: 104557533
NCBI-ProteinID: XP_010200085
LinkDB
Position
Unknown
AA seq 146 aa
LPVVSVVRDAESQLLPDVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIR
ATEKDKVEVYKSFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISW
CEMQCPRTHTKDFRKVARVQPQFLQT
NT seq 441 nt   +upstreamnt  +downstreamnt
ctgcctgtggtgtcggtggtgagggacgccgagtcccagctcctgcctgacgtgggggcc
gtggtcacgtgcaaggtctgcagcattaactcccgctttgccaaggtgcacatcctgtac
gttggatccacgccgctgaaatctaccttccgggggaccatacggagagaagatattcga
gccacggagaaagataaggtagaagtgtacaagagtttccgccctggggacatagtcctg
gctaaagttatctccctgggggacgcgcagtccaactacctgctgagcacggcagagaac
gagctgggcgtcgtagtggcacgaagcgaggcaggggtgcagatggtgcccatcagctgg
tgcgagatgcagtgcccacggacacacaccaaggacttccgtaaggtggcccgtgtgcag
ccccagttcctgcagacgtaa

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