Colius striatus (speckled mousebird): 104557636
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Entry
104557636 CDS
T08355
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104557636 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104557636 (NDC1)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104557636 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
104557636
NCBI-ProteinID:
XP_010200240
UniProt:
A0A091KVF2
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All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
VLGWRVAAAVAWSVLLLPVLTAAFVVFSGLDPFHPVRWISNSLNDLYTSYVIFYIFLLSL
VIVVISIFNAEFYTVVPSIPCSRLALIGKVIHPQQVFHSVAHGVMGMLVAWCAAVMTKGK
FQFLAVPCTPSESLDDAVPQMCLNEYHLFFLLFGAFMGYSYSLLYLINNMNYLPFPIIQQ
YKYLRFRRSLPLLIRHSCVESLYFVRNFCVTYYFFGYIPKVWISTTMDLHIDSKLHPLDS
LTGLLDLSLFYHAWLCGVFLLITWYIAWLLFKIYATETHHFPVQPTFAEETDQCLPKILS
SNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISRECLNLLSDLTQRL
IAQQEAAAANGRAKQPAGELKVSPQTPGALGIEDRSFQSPWSNVVPRASMSSLVKSSLMP
LKSSSGAGSPFGAGSPFGSPALNSKVGDVDVSSPWHGSSQSPHVVRRGPKLWTSGSDLQM
NGSHHKSFTVPSPARAGSEAVQPRFIYTWLQNKQEQIKTFLSKRVLIMYFFSKHPEASIQ
AVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVVDRHFKLPHVS
SKPPRTSGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSAEHKKRLQQFLEY
KE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgctgggctggagggtggcagctgctgttgcctggtctgtgctgcttctgcctgtcctg
accgcggccttcgttgtcttcagtggccttgaccccttccacccggtgcgctggatctcc
aattctctcaatgatttatatacttcctacgtcatcttttacatcttccttctgtctctg
gtgatagtcgtaataagcatcttcaacgctgaattttatacagttgtgccatcaatacca
tgctctcgattagcactgataggaaaggttattcaccctcagcaagttttccattcagtt
gctcacggtgtcatgggaatgttggttgcttggtgtgctgcagttatgacaaaagggaag
ttccagtttcttgctgtgccctgcacgccttcagaaagcctagatgatgctgttcctcag
atgtgcctgaatgagtatcacctcttttttctactttttggagctttcatgggatacagt
tacagtcttctgtatcttattaacaacatgaattatttgccatttcccatcatacagcaa
tacaagtacttacgtttcagaagatctttgcctctcctcattaggcacagttgtgtggaa
tcactgtattttgttaggaacttctgtgtcacctattacttttttggttatatcccaaag
gtatggataagtaccacgatggatcttcatatagacagtaaactgcatcctcttgactct
ctgacgggcttgttggatctctccttgttttaccatgcctggttatgtggtgtatttctt
ctgattacctggtacattgcgtggttactcttcaaaatctatgctacagaaacacatcat
tttcctgtccagccaacttttgctgaagagacagaccagtgcctgcctaaaatcctaagc
agcaacccccctctcattataaagtttctagccttacaagacttgatgctgctttcccag
tattctcctgttcgacgccaggaggtctttagccttagtcagccaggtgggcacccacac
aactggactgcaatatcaagagagtgtttgaatcttctgagtgatctgacccagaggctg
atagcacagcaggaagctgcagcagcaaatgggagagcaaagcagccagcaggagagctg
aaagtgtctccacagactccaggagcccttgggatagaagatagatctttccagtcacca
tggtctaacgtcgttcccagagcctccatgtcttcactggttaaatcatccctaatgcct
ttaaagtcatcgtctggggctggttcaccttttggggctggttcaccttttggctcacct
gctttaaattccaaggtgggagatgtggacgtaagctctccttggcatggatcaagccaa
agccctcatgttgttagaaggggaccaaagctgtggacatcaggttcagatctgcaaatg
aatggttcccaccacaaatccttcacagtaccctctcctgcaagagctggcagtgaggca
gtacagccaagatttatttacacctggcttcagaacaagcaagaacagataaaaaccttc
ttgtcaaaacgagtgctgataatgtatttcttcagcaagcacccagaagcctccatccaa
gctgtcttctctgatgcccaaatgcacatctgggctttggaaggtctgtctcatttggta
gcagcctcctttactgaagaccaatttggagttgtccaaactacactgccagctatcttg
aacactttactgactcttcaggaggttgtagacagacatttcaaactgcctcatgtttcc
agcaagcccccaaggacttcaggcagtctggtggacacatcctacaaaacgctacggttt
gcgctgcgagcctccctgaaaacggcactgtaccgcataaccactgtctttggagaacac
ctgaatgcagtgcaagtgtctgcagaacataagaaaagacttcagcagttcctggaatat
aaagagtaa
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