KEGG   Colius striatus (speckled mousebird): 104557636
Entry
104557636         CDS       T08355                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
csti  Colius striatus (speckled mousebird)
Pathway
csti03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csti00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104557636 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csti03019]
    104557636 (NDC1)
Messenger RNA biogenesis [BR:csti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104557636 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 104557636
NCBI-ProteinID: XP_010200240
UniProt: A0A091KVF2
LinkDB
Position
Unknown
AA seq 662 aa
VLGWRVAAAVAWSVLLLPVLTAAFVVFSGLDPFHPVRWISNSLNDLYTSYVIFYIFLLSL
VIVVISIFNAEFYTVVPSIPCSRLALIGKVIHPQQVFHSVAHGVMGMLVAWCAAVMTKGK
FQFLAVPCTPSESLDDAVPQMCLNEYHLFFLLFGAFMGYSYSLLYLINNMNYLPFPIIQQ
YKYLRFRRSLPLLIRHSCVESLYFVRNFCVTYYFFGYIPKVWISTTMDLHIDSKLHPLDS
LTGLLDLSLFYHAWLCGVFLLITWYIAWLLFKIYATETHHFPVQPTFAEETDQCLPKILS
SNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISRECLNLLSDLTQRL
IAQQEAAAANGRAKQPAGELKVSPQTPGALGIEDRSFQSPWSNVVPRASMSSLVKSSLMP
LKSSSGAGSPFGAGSPFGSPALNSKVGDVDVSSPWHGSSQSPHVVRRGPKLWTSGSDLQM
NGSHHKSFTVPSPARAGSEAVQPRFIYTWLQNKQEQIKTFLSKRVLIMYFFSKHPEASIQ
AVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVVDRHFKLPHVS
SKPPRTSGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSAEHKKRLQQFLEY
KE
NT seq 1989 nt   +upstreamnt  +downstreamnt
gtgctgggctggagggtggcagctgctgttgcctggtctgtgctgcttctgcctgtcctg
accgcggccttcgttgtcttcagtggccttgaccccttccacccggtgcgctggatctcc
aattctctcaatgatttatatacttcctacgtcatcttttacatcttccttctgtctctg
gtgatagtcgtaataagcatcttcaacgctgaattttatacagttgtgccatcaatacca
tgctctcgattagcactgataggaaaggttattcaccctcagcaagttttccattcagtt
gctcacggtgtcatgggaatgttggttgcttggtgtgctgcagttatgacaaaagggaag
ttccagtttcttgctgtgccctgcacgccttcagaaagcctagatgatgctgttcctcag
atgtgcctgaatgagtatcacctcttttttctactttttggagctttcatgggatacagt
tacagtcttctgtatcttattaacaacatgaattatttgccatttcccatcatacagcaa
tacaagtacttacgtttcagaagatctttgcctctcctcattaggcacagttgtgtggaa
tcactgtattttgttaggaacttctgtgtcacctattacttttttggttatatcccaaag
gtatggataagtaccacgatggatcttcatatagacagtaaactgcatcctcttgactct
ctgacgggcttgttggatctctccttgttttaccatgcctggttatgtggtgtatttctt
ctgattacctggtacattgcgtggttactcttcaaaatctatgctacagaaacacatcat
tttcctgtccagccaacttttgctgaagagacagaccagtgcctgcctaaaatcctaagc
agcaacccccctctcattataaagtttctagccttacaagacttgatgctgctttcccag
tattctcctgttcgacgccaggaggtctttagccttagtcagccaggtgggcacccacac
aactggactgcaatatcaagagagtgtttgaatcttctgagtgatctgacccagaggctg
atagcacagcaggaagctgcagcagcaaatgggagagcaaagcagccagcaggagagctg
aaagtgtctccacagactccaggagcccttgggatagaagatagatctttccagtcacca
tggtctaacgtcgttcccagagcctccatgtcttcactggttaaatcatccctaatgcct
ttaaagtcatcgtctggggctggttcaccttttggggctggttcaccttttggctcacct
gctttaaattccaaggtgggagatgtggacgtaagctctccttggcatggatcaagccaa
agccctcatgttgttagaaggggaccaaagctgtggacatcaggttcagatctgcaaatg
aatggttcccaccacaaatccttcacagtaccctctcctgcaagagctggcagtgaggca
gtacagccaagatttatttacacctggcttcagaacaagcaagaacagataaaaaccttc
ttgtcaaaacgagtgctgataatgtatttcttcagcaagcacccagaagcctccatccaa
gctgtcttctctgatgcccaaatgcacatctgggctttggaaggtctgtctcatttggta
gcagcctcctttactgaagaccaatttggagttgtccaaactacactgccagctatcttg
aacactttactgactcttcaggaggttgtagacagacatttcaaactgcctcatgtttcc
agcaagcccccaaggacttcaggcagtctggtggacacatcctacaaaacgctacggttt
gcgctgcgagcctccctgaaaacggcactgtaccgcataaccactgtctttggagaacac
ctgaatgcagtgcaagtgtctgcagaacataagaaaagacttcagcagttcctggaatat
aaagagtaa

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