Colius striatus (speckled mousebird): 104557790
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Entry
104557790 CDS
T08355
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csti04040
]
104557790 (TRPA1)
Ion channels [BR:
csti04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104557790 (TRPA1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104557790
NCBI-ProteinID:
XP_010200442
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
TALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASWKIVNLLLSKGANVSLKDHLG
RNFLHLTVLQPGGLQHLNEKFLQMEHIKNLVVDEDNEGCTPLHYACRQGVALSVNNLLSL
NVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLLNEGDKKGMTPLHLAAQNGHE
KVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILDTNVKCTDRVDEEGNTALHLA
AREGHAKAVRLLLDYGAKILLNKAVASFFHEAIHNRRKDVVSAVILHKRWEEAVLTFSHY
SSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFYIEYNFRYLQCPLTLNKKLKD
GEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAYGFRAHLMNLGIYSLGLIPLT
LLVTHIQPGRPLNGTEVYEARPLEYENSYFTRVCMCLVLIMSLLGICKEIFQLIQQKLKY
LLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAVYLSWMNFLLYLQRFENYGIY
VVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYSTPLLSVMKTFAMMLGDINYH
DAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGLAVGDIAEVQKYAALKRIAMQ
NT seq
1981 nt
NT seq
+upstream
nt +downstream
nt
gacagcattgtttgatcattacgaactggccgagtatttgatttcaatgggggctaatat
tgatagtgttgacatagaaggtcgatccccacttctgttggccacttcctgtgcatcatg
gaaaattgtgaatttactgctctcaaaaggagcaaatgtatcgttaaaagatcatcttgg
tcggaatttcttgcatttgacggtgttgcaacctggaggattacagcatctgaatgagaa
atttctgcagatggaacatattaaaaatcttgtagtggacgaagataatgagggatgcac
tccattgcattatgcatgcagacaaggtgtggcgctctctgtaaataatttactcagcct
caacgtttccatctattctaagagcagggacaagaagtcaccattacactttgctgccag
ctatgggcgcatcaatacatgtcaacgacttataagagatatgaaagacacgagactttt
gaatgaaggtgataagaagggaatgactccccttcatttggcagcccagaatggtcatga
gaaagtagttcagtttcttctgaagagaggagccctttttctctgtgattataaaggctg
gacagccctgcaccatgctgcctttggaggatacactcgcacaatgcagatcattttgga
tactaatgtgaagtgtactgacagagtggacgaagaagggaacacggctttacacctggc
tgcaagagaaggacatgcaaaagcagtaaggttacttcttgattatggtgcaaaaattct
gttgaacaaagcagtagcttcttttttccatgaagcaatacacaacaggagaaaggatgt
tgtgtctgctgtcattttgcataaaagatgggaagaagctgttttgaccttctctcacta
ctccagtgccaataagtgtcctttgctggaaatggttgagtatcttcccgattcgtttaa
actggttttggacaactgcataatcgagtcttcagaggaaaagacaagtcgagacttcta
tattgaatataacttcaggtatcttcagtgtcccctaacgcttaacaagaaactaaagga
tggtgaggacattttctatgaaccacttaccactttaaatgccatggtacgccacaaccg
catggagctactcagtcatcctgtgtgtaaggaatatttgcttatgaagtggatggccta
tgggtttcgagcacacctgatgaatttaggcatatattctcttggtctcatcccactgac
tcttctggtcactcacatacagccaggaagacctttgaatggaacagaggtctatgaagc
aagaccgttagaatatgagaactcgtacttcacgagagtgtgtatgtgtttagttttaat
tatgagtttactgggaatctgcaaagaaatatttcagctgatacagcagaaattgaagta
tttgttggattactccaatctactggactggacaatttatactacaagcataatttttgt
gtcttctttatttattaatacaccagcccatttgcagtgggaatgtggagcgattgctgt
atacttatcttggatgaacttcttgctttaccttcaacgatttgaaaactatggcatcta
tgttgtgatgttctgggaaattctgaggactttgattcggattgctgttgttttcttttt
cctgatacttgcctttggactcagtttttttgtccttttgggttcacagcaaacgtatag
cacacctctgctttctgtaatgaagacatttgctatgatgctgggagacattaattacca
tgatgcattccttgatccattgctaagcagtgaattgccatatccattcctgagttacac
agttctcattatatttaccttgcttattccaatccttcttatgaacttgctaattggttt
ggctgttggggacatagctgaagtacaaaaatacgctgcactcaaaagaattgcaatgca
g
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