Colius striatus (speckled mousebird): 104557791
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Entry
104557791 CDS
T08355
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csti04121
]
104557791
Enzymes [BR:
csti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104557791
Ubiquitin system [BR:
csti04121
]
Ubiquitin ligases (E3)
U-box type E3
104557791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104557791
NCBI-ProteinID:
XP_010200443
LinkDB
All DBs
Position
Unknown
AA seq
1677 aa
AA seq
DB search
MCLIFCEQIDDSSASISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPLG
PPPPSYTCFRCGKPGHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLT
NTGKYAIPTIDAEAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIP
CCGNSYCDECIRTALLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLR
KQAKQQQQQPQPPPPPPPPPPLMRQTITRNLQPLLRPTISRQQDPLMIPLASLASRSALS
LGPGPSVAAGLPVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADVLPPAALRTAVELSKS
SSLSISSLLEEKGYQVPVLRQPALPSLLGPQGQSIPTTGHPMRASTIRSAGGRPGWELSN
RGRPHGDRSQRTQAPTLPASTPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQP
PSAGYPVPPPGYPPAPANMSSGWVPAAVPTPHSNTIPTTQAPPLSREEFYREQRRLKEEE
KKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRS
RSYSRSFSRSHSRSYSRSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRS
PVFRGQSPTKRTIPQGEGEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNY
REWYEKFYKGYAVGAQPRPPVARENFSPDRFGPPGTRRENSPYARGRREDYPGGQSHRNR
NIAGSYPEKPSGRESHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNAE
LLEGTRKPREPVAAEDAKTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKP
KAKVDKTKRKVEVSALPKKDNTVKPAKASQEKLDTDREKSPRTEPPVKKAKEDLPKTDSV
KASSSQKDEKALGTPRKVHPKVTKDHPETRPAKEEKAKKDHPKETKSEKPSKEDKSKKPA
EKSKPSDAKPEKRKRKADEKGDKEHETTSVKASKAETAESKTSPKGKAEPDGEKGERTPE
KDKAAFLNNPAKKIKLNRETGKKIVSGENVPPAKEPAEKPELSSSKVKQEKAKGKVRRKV
TAADGSSSTLVDYTSTSSTGGSPVKKTEEKTDTKRTVIKTMEEYNNDITAPAEDVIIMIQ
VPQSKWDKDDFESEEEDIKSTQVPTNVGKPSSIIKNVSAKPPNPIKHNEKEIEPLEKIQK
MTKEVSYESSQHDAKSSKSSMSNEKGKTKDRDHSLLDKDTSEKRKSSVQPEKDHSERAAE
QGNGKNISQSSKDSRSSEKHDTGRGSTTKDFTPNRDKKSDHDGNRDHSSSKRRDEKSELA
RRKDSPSRNRESASVQKSKPRDERTEPSKKGTVEAKRSSYSPPRERKQSDHKAAHDSKRA
TEEHKPLDKNKEKEKEKHVPEVKSNKEKEPSGNKPPLRQESLEVKIEKETVTAQNDKSVV
KPKPQVSSSSRLSSDPTRETDEAAFVPDYNESDSESNVSAKDEEAAAKTPKELKEKPVDK
AKEETAVPAAAEQPEASRSQSQSSPSISRSRSQSPSESQTRSHSSSASSGESQDSKKKKK
KKEKKKHKKHKKHKKHKKHVGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttaattttttgtgaacagattgatgactcttctgcatctatttctctggcccag
cttactaagactgccaatctggctgaagccaatgcttccgaagaagataaaataaaagct
atgatgacacagtctggccatgaatatgatccagtcaattacatgaagaaacccttgggc
ccacctccaccatcatacacttgcttccggtgtggaaaacctggccactatataaagaac
tgcccaaccaatggggacaaaaattttgagtcagttcccagaattaaaaagagcactgga
attcccaggagtttcatgatggaggtgaaagatcccaatacgaagggtgctatgctgacc
aacactggaaaatatgcaataccaactattgatgcggaagcttacgctataggaaagaag
gaaaagcctccctttttaccagaggagccatcatcctcctcagaagaagatgatcctatt
ccagatgagttgttatgtctcatttgtaaagatataatgactgatgcagttgttattccc
tgctgtggaaacagttattgtgatgaatgtattagaacagcattactagaatctgaggaa
catacgtgcccaacatgtcatcagacagacgtttctcccgatgctttaattgccaacaag
ttcctacgccaggccgtgaacaacttcaaaaatgaaactggctacacaaaaagactccgt
aagcaggctaaacagcagcagcagcaaccgcaaccaccgccgccgccgccacctccacca
ccactcatgagacaaacaataacacgcaacctgcagcctctactccggccgacaatttcc
agacagcaggatccactaatgattccattagcttctctggcttcacgttctgctttgtcg
ttgggccctggtccatctgtggcagctggactgccagtaaacccatcttctgttgttgtt
tctgatctccctccagcagtgtcactatctctccgtggtgaaaagccagatggacctttt
cgtgatgcggatgttttacctcctgctgctctgaggaccgccgttgaactttctaaatct
tcctctctgtcaatcagcagtttgttggaagaaaagggctatcaggttcctgtactaaga
caaccagcattgccaagtcttctgggtccccaaggacagtccatacccacaactggccat
ccaatgagagccagtaccattcgctctgcaggtggcagaccaggctgggaactttcaaat
agaggacgcccgcatggtgaccgttcccaaaggactcaggccccaacattaccagcatca
acaccagtctttgtgcctgtgcctccacctcccttgtatcctccaccaccccatgcactt
cctcttccgccgggggtgccaccaccacaatttcctcctcagtttccacctggtcagcct
ccatctgctgggtaccctgtcccccctccaggatatcccccagctcctgcaaacatgtca
tcaggttgggtaccagcagcagtaccaacgcctcattcaaataccatcccaacgacacaa
gcacctcctttatctagggaggagttttacagagagcaacggaggctcaaagaggaggaa
aagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaattgatggaatat
aaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtctccctatagtgct
tcttcttactccagaagttcatatacctactccaagtcaagatcaggttcttcccgttct
cgctcctactctcgctccttcagtcgttcccactctcgctcctactcacgatcaccacca
tacccaagaagaggcaaaggaaagagtcgcaactatcgttctaggtcaaggtcacatggt
tatcaccgttcaagatcgaggtcacccccgtacaggcgatatcattcacggtcgaggtct
ccagtattcagaggccagtctcccaccaaacggactatacctcagggagaaggagaaagg
gagtattttaacagatacagagaagttccaccctatgatatgaaggcctactatggcagg
tctgttgacttcagagatccctttgaaaaggaacgatacagagaatgggaaaggaactac
agagaatggtacgagaagttctacaagggctatgctgttggtgctcagcctcgacctcca
gtggccagagagaacttttctccagataggtttggtccacctgggacgagacgagagaat
tcaccatatgctcgaggacgtagggaggattatcctggtggacagagccacagaaatcga
aatatagccggaagttaccctgaaaaaccttctggaagagagagccatggcatcaaagat
cctacaaaatcaaaagagaaggaggtggaaaatcccctgggagatggcaaaggcaataaa
cacaaaaaacaccggaagagaagaaagggggatgagaatgaaggatttcccaatgccgag
ttgttggaaggtacgagaaaaccaagagagccagttgcagcagaagatgctaaaacggac
tctctgttcatgctcccaagcagagatgatgccaccccagtgagagatgagcctatggaa
gcagattctattgctttcaaaccagtgtctgaaaaggagaaaaaggagaaggataagcca
aaagcaaaagttgacaagacaaagcggaaagtagaagtgtctgctcttcctaagaaagac
aatacagtaaaaccagctaaagcttcccaagagaagttggacaccgatcgtgaaaaatct
cctcgaacagaacctcctgtgaaaaaggcaaaggaggatttgccaaagacagacagtgtt
aaagcatcttcttctcaaaaggatgaaaaggctcttggtaccccacggaaagttcaccca
aaagttacaaaagatcacccagaaaccagaccagccaaggaggagaaggcaaagaaagac
catccaaaagaaaccaagtcagagaagccctccaaagaggacaagtcgaagaaacctgca
gaaaaaagcaaaccttctgatgcaaaacctgaaaaaagaaaaagaaaagcagatgaaaag
ggtgataaagaacatgaaaccacttctgtaaaggcctccaaagcagaaactgctgaatcg
aaaacatcgccgaaggggaaggctgagcctgatggtgaaaagggagagcgaactccagaa
aaggataaagctgcttttcttaacaaccctgcaaagaagattaaacttaaccgcgaaact
ggcaaaaagattgtgagtggagaaaatgtgccacctgcaaaggaacctgctgagaaacca
gagctgagcagcagcaaagttaaacaagaaaaagcaaagggaaaagtgagaaggaaagta
acagccgctgatggatccagttcaactcttgtagattataccagcactagttctactgga
ggaagccctgttaaaaagactgaagaaaagacagatacaaaacgaactgtcattaagacc
atggaggagtacaataatgatataacagcccctgctgaagatgtcattattatgatccaa
gtccctcagtccaagtgggataaagatgactttgagtctgaagaggaagacattaaatct
acccaggtgcccacaaatgtaggaaaaccttctagcattatcaaaaatgtgagtgctaag
ccacccaaccctataaaacacaatgaaaaagagattgagcctttggagaagatacagaaa
atgacaaaagaagtgagttatgaaagctcccagcatgacgcaaaaagttccaaaagttcg
atgtcaaacgaaaaaggcaaaaccaaagaccgggatcattctttgttggacaaggacact
tctgagaagaggaagagcagtgttcagccagaaaaagaccactcggaacgtgcagctgaa
cagggaaatggaaaaaacatttctcagtcttccaaagacagcagatcttcagagaaacat
gatactggccgtggatccaccactaaagacttcactcctaatcgtgacaaaaaatccgac
cacgatggcaacagagatcattctagttccaagcgtagagatgaaaagagtgaattggca
aggagaaaagactccccctctcgaaacagagaatctgcatcagtacagaagagtaaacct
cgagatgagcgcacggagccatccaaaaagggcaccgtagaggccaagcggagcagctac
agccctccacgggagcggaagcagtctgatcacaaagctgctcacgactccaagcgggcc
acagaggaacacaaacctctagataaaaataaagagaaggagaaagagaagcacgtacca
gaggtaaagagcaataaagagaaagagccaagtggtaacaaacctcctttgagacaagag
tcgctagaggtaaaaattgagaaagagaccgtgactgcacagaacgataaaagcgtggtg
aagcccaagcctcaggtaagcagctcctcacggctctcttcagatccaactcgagagact
gatgaggctgcttttgtgccagactacaacgaaagtgacagtgagagtaatgtatctgca
aaagatgaggaagctgcagcaaaaactcctaaagagctgaaagaaaagcccgttgataag
gcaaaagaagagacagcagttcctgctgcagctgagcagcctgaagcaagccggagtcaa
agccagagcagccccagcatcagccgcagccggagccagagcccgtctgagagtcagact
cgaagccacagcagcagtgccagctcaggagagagtcaagacagcaagaaaaagaagaag
aaaaaagagaagaaaaagcacaagaagcataaaaaacataagaagcataagaaacacgtg
ggaaacgaaaccgaattggaaaagagccaaaaacacaaacataaaaagaaaaaatcgaag
aagagtaaagataaggagaaagatgaccaaaaagtgaaatctgtcaccacatag
DBGET
integrated database retrieval system
