Colius striatus (speckled mousebird): 104558313 Help Entry 104558313         CDS       T08355                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism csti  Colius striatus (speckled mousebird) Pathway csti04140   Autophagy - animal csti04142   Lysosome biogenesis csti04145   Phagocytosis csti04148   Efferocytosis csti05132   Salmonella infection Brite KEGG Orthology (KO) [BR:csti00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     104558313 (VPS39)    04142 Lysosome biogenesis     104558313 (VPS39)    04140 Autophagy - animal     104558313 (VPS39)    04148 Efferocytosis     104558313 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     104558313 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csti04131]     104558313 (VPS39) Membrane trafficking [BR:csti04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     104558313 (VPS39) SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin VPS18_solenoid_2nd Beta-prop_RIG_2nd Lgl_C LIF1_N SAM_CEP-1_C DUF4145 EcoR124_C Motif Other DBs NCBI-GeneID:  104558313 NCBI-ProteinID:  XP_010201148 LinkDB All DBs Position Unknown AA seq 850 aa AA seqDB search EWLLVGTKQGHLLLYRIKKDTGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENN IYVHDLLTFQQITTVSKAKGASLFTCDLQQGKQGEEVLRMCVAVRKKLQLYFWKDREFHE LQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADG KVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLV QSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDD SDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQ YPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKL LQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHE KALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTED LPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGADFHNCLIQLYCEKVQGLMKE YLSSFPADKTPVPAGEEGGDLGDYRKKLLLFLEKSSWYEPSRLISDFPFDGLLEERALLL GRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGP IKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKR FNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYF CSKEVNTLDT NT seq 2555 nt NT seq  +upstreamnt  +downstreamnt aggaatggctccttgttggtaccaaacaagggcatcttctgctctataggatcaagaaag atacaggctgcaatcgatttgaagtgacgttagagaaatccaacaagaacttctcaaaaa agatccagcagattcacgttgtttcacagttcaagattctggtcagtttattagaaaata acatttatgttcatgacctgttgacgttccaacaaatcaccacggtttccaaggcaaaag gtgcatctctcttcacttgtgatcttcagcaggggaaacagggggaagaggtgttgagaa tgtgcgtggcggtgcggaagaagctacaactgtatttttggaaggacagagagttccatg agctacagggggatttcagtgtacctgatgtacccaagtctatggcctggtgtgaaaact cgatctgtgtaggtttcaagagggactattacctgataagggtggatgggaaagggtcca tcaaagaactgtttcccacagggaagcagctggaaccattggtagctcctgtagcagatg gaaaagttgctgttggccaagatgacctaacagttgtgctcaatgaagaaggagtctgta ctcagaagtgtgccttaaattggacagatattcccatagccatggaacaccagcctccct acatcattgctgttctgccaaggtacgtggagatccgcacgtttgaaccccggctgctgg tccagagtattgagctgcagagaccacgcttcatcacctcaggagggacaaatattatat atgtggcaagcaatcacttcgtctggaggctcattccagtgtccatagccacacagatcc agcagcttctgcaggacaagcagtttgagctggctttgcagctggcagaaatgaaagatg attcagacagtgagaagagacaacaaattcaccacataaagaacctctttgccttcaacc tcttctgccagaagcgcttcgatgaatccatgcaagtgtttgccaagcttggtacagatc ccactcatgtgatgggtctgtatcctgacctcctgcccacagactacaggaaacagctcc agtatcccaaccccctgccaggactgtctggggcagagctggagaaggcacatttagctc tgatagactacctaactcaaaaaagaagtcagctggtgaagaagctgaatgattctgacc atcaatccagtacctcacctctcatggaaggaactcccactatcaaatccaaaaagaagc tgctacaaatcattgataccactctgctgaagtgttacctccatacaaatgtagcgctgg tggcaccgttgctacgcctggagaacaatcactgccatattgaggagagtgagcatgtac tgaagaaggcacataaatatagtgagctgatcatattgtatgagaagaaaggtctgcatg aaaaagcattgcaggtactggtggatcagtccaagaaagctaactcacctttgaagggcc atgagaggacagtgcagtatttgcagcatttgggcacagagaatttgcacttggtatttt cctactctgtctgggtactaagagatttccctgaagatggactgaagatatttacagaag acctgccagaggtggaagctttgccacgagacaaagtgctcagtttcttgatagagaact ttaaaagcttgactattccttatctggagcacatcattcatgtctgggaagaaaccggtg cggactttcacaactgtctgatccagctgtactgtgagaaagtgcagggcttaatgaaag aatacctcagttctttccctgcagataaaactccagtgcctgctggagaggagggaggag acttgggagattatcggaagaagctgttgctttttctggagaagtcaagctggtatgaac ccagtcgcctaattagtgacttcccctttgatggtctcctagaagaacgtgctctgctct tgggacggatggggaagcacgagcaagctctctttatttatgttcatattttgaaggaca ccaacatggctgagaactactgccataaacattatgacagaaacaaagatggcaacaaag atgtctatttgtccctgctccggatgtatctctccccacccagcgttcactgcctgggac caatcaaaatggaagtgctggagcctcaagccaacctgcaggctgctctgcaggttttgg aactacatcacagcaagttggataccaccaaggcaataaacctactcccagcaaatacac agattagtgagattcgaatcttcttagagaaagtccttgaagaaaatgctcagaagaaga gatttaatcaggtgctcaagaatcttctccatgcagagtttctgagggtccaggaggagc ggatcttgcatcagcaagtgaagtgcattattacagaggagaaggtgtgcactgtatgta aaaagaagataggtaacagtgcatttgctcgataccctaatgcaatagttgtgcattatt tctgctccaaagaagtcaacaccttggacacctga

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