Colius striatus (speckled mousebird): 104558657 Help Entry 104558657         CDS       T08355                                  Symbol COPA Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism csti  Colius striatus (speckled mousebird) Brite KEGG Orthology (KO) [BR:csti00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csti04131]     104558657 (COPA)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:csti04147]     104558657 (COPA) Membrane trafficking [BR:csti04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     104558657 (COPA) Exosome [BR:csti04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    104558657 (COPA)   Exosomal proteins of bladder cancer cells    104558657 (COPA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd TPR_COPA_B Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  104558657 NCBI-ProteinID:  XP_010201636 LinkDB All DBs Position Unknown AA seq 1185 aa AA seqDB search MCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT FFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTV RVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPL IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS KRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDR FLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENTVLLCTRASNLENSTYDLYTIPKD ADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYA GTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLE SLCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVY CLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVAL HFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKN FDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAY LTAATHGLDEEAESLKETFDPEKETIPDIDHNAKLLQPPAPVMPLDTNWPLLTVSKGFFE GTIASKGKGGALAADIDIDTVGTEGWGEDAELQLDEDGFVDAGEGFADEGLGKGQEEGGG WEVEEDLDLPPELDVPAGPSGSAEEGFFVPPTKGTSPTQVWCNNSQLPVDHVLAGSFETA MRLLHDQVGVTNFGPYKQLFLQTYARGRVTYQALPCLPAMYGYPHRNWKEAGLKNALPAI GLKLNDLIQRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICRE YIVGLSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFK TAATFARRLLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRG KPVEKCPLSGACYCPDFRGQICRVTTVTEIGKDVIGLRISPLQFR NT seq 3558 nt NT seq  +upstreamnt  +downstreamnt atgtgcaccctcatcgacaagttcgacgagcacgacgggccagttcgaggcattgatttc cacaaacagcagcctctgtttgtttctggaggtgatgattacaaaataaaggtctggaat tacaaactgcgccgctgcctcttcactctgctggggcacctggattatattcgcaccacc ttcttccaccatgaatatccctggatcttgagcgcttctgatgaccagaccattcgggtt tggaactggcagtccagaacttgtgtctgtgtgctgacaggacacaaccactatgtgatg tgtgcccagttccacccctctgaggacctggtggtgtcagccagcttggatcagacagtg cgcgtttgggatatttctggcctcaggaagaagaacctgtcccctggagctgtggaatcc gatgtcaggggaataacaggagtggatttgtttgggacaacggatgcggttgtgaagcac gttcttgagggccacgacaggggtgtgaactgggctgccttccaccccacgatgccgctc attgtgtcgggagccgacgatcgacaagtgaagatctggcggatgaacgaatccaaggcc tgggaggttgacacttgccgggggcattacaacaacgtctcatgtgccgtctttcaccca cgccaggaactcatcctcagcaattcagaggacaagagcatccgtgtctgggatatgtcc aaacgcacgggtgtccagaccttccggcgggatcacgatcgcttttgggtgttggctgct catcccaacctcaacctctttgctgcaggccatgatggtggcatgatcgtgttcaagctg gagagggagcgccctgcgtatgccgtgcacgggaacatgctctattatgtcaaggaccgt ttcctccgccaacttgatttcaacagctccaaagatgtggctgtcatgcagctgcgaagt ggttccaagttccctgtgttcaacatgtcctacaacccagctgagaatactgtccttctc tgcacaagagccagcaacttggagaacagcacttatgacctctacaccattcccaaggat gcagactcccagaatccggatgcccctgaagggaaacgttcctccgggctaacagctgtg tgggtggctcgtaaccgctttgcagtcctggatcggatgcattcgatcctaatcaaaaac ctgaagaatgagatcaccaagaaggtgcaggtgccgaactgtgatgagattttctatgct ggcacagggaacctgttactgagggatgcagactccatcaccctctttgacgtgcagcag aagcgaactctggcctcagtgaagatctcaaaggtgaaatacgtcatctggtcagctgac atgtcccatgtggctctgctggcaaagcacgccatcgtgatctgcaacagaaagctggag tcgctctgtaacatccacgagaacatccgtgtcaagagtggagcctgggatgagagtggt gttttcatctataccaccagcaatcacatcaaatatgctgtcaccacaggggatcacggg attatccgcaccctggacctacccatctacgtcacccgtgtgaagggcaacaatgtctac tgcctggacagagagtgtcgccccagggtcctcaccattgaccccacagagttcaaattc aagctggcactaatcaacagaaagtatgatgaggtgctgcacatggtgaggaatgctaaa cttgtgggccagtccatcattgcctacctgcagaaaaagggctacccagaggtggccctc cactttgtcaaggatgagaagacccgtttcagcctggccctggagtgtggcaacattgag attgctttggaagcagccaaagctctggatgacaagaattgctgggaaaaactgggagaa gtggccttgctgcaggggaatcaccagattgtggagatgtgctaccagcgcaccaagaac tttgacaggctctccttcctctacctcatcactggcaacctggagaagcttcgcaagatg atgaagatagctgaaatccgtaaagatatgagtggccactaccagaatgccttgtaccta ggggatgtggcagagagagtgaggatcctgaagaactgtgggcaaaagtccctggcctat ctcacagctgcaactcatgggctggatgaggaagctgagagcctgaaggaaacatttgat cctgaaaaggaaacgatcccagacattgatcacaatgcaaagctgctgcagcctcctgct cctgtcatgcctctggacaccaactggccattgctgactgtctccaagggattctttgag ggaaccattgctagcaaaggcaaagggggtgctttggctgctgatattgatattgacact gttggcactgaaggttggggagaagatgcagagttgcagctggatgaagatggctttgtg gatgctggagaaggctttgcagacgaaggtctaggtaaaggacaggaagaaggaggtgga tgggaagtcgaagaagatttagatcttccccctgaactggatgttcctgcaggtccatct ggatcagcagaggagggattctttgtgccacccaccaagggcaccagcccaactcaggtg tggtgcaacaattctcagcttcctgttgaccacgttctggcaggctcctttgagacagca atgagactcctccatgaccaagtaggagtaacaaactttggaccctacaagcagctcttc ctgcagacttatgcccgtggccgtgtgacctaccaagccctgccatgtctccctgccatg tatggatacccacatcgtaactggaaagaagctggcttgaagaatgccctccctgccatt ggcctcaaactcaacgacctgatccagcgcctgcagctctgttaccagctcactacagcc ggcaagttcgaggaggccgtggagaaattccgctccatcttgctcagtgtccccttgctg gtggtggacaacaaacaggagattgctgaggcccagcagctcatagccatttgccgggag tacatcgttgggctctcgatggagatcgagaggaagaagctgcccaaagagaccctggag cagcagaaacgaatctgtgagatggctgcctatttcacccactccaacctacagcctgtc cacatgatcctggtgcttcgaactgctctcaacctcttcttcaaactcaaaaacttcaag acagctgcaacctttgcccggcggctgctggagctggggccaaagcctgaggtggcccag cagactcgtaagatcttgtcagcctgtgagaagaatcctacagacacctaccagctcaac tatgacatgcacaacccctttgacatctgtgctgcctcttaccgacccatctaccgtggt aaacccgtggagaagtgtcctctgagcggggcctgttactgccctgacttccgtgggcag atctgccgtgtcacaacggtgacagagattggcaaagatgtcattgggctgcgcatcagc cccctgcagttccgttag

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