Colius striatus (speckled mousebird): 104558744
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Entry
104558744 CDS
T08355
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein-like
KO
K13203
zinc finger RNA-binding protein
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csti03041
]
104558744
Spliceosome [BR:
csti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104558744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
104558744
NCBI-ProteinID:
XP_010201746
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
SQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVXXXXXXXXXX
XQGAVAAAATAAAYGGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPA
VAYDSKQYYQQPTATVAAAAQPQPSVAESYYQTAPKAGYSQGATQYTQAQQTRQVTAIKP
ATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSA
ASSYYQQQQQQQKQSAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKI
SCAGPQTYKEHLEGQKHKKKEAALKASQNTNNSSTSARGTQNQLRCELCDVSCTGADAYA
AHIRGAKHQKVVKLHTKLGKPIPSTEPNVVTQATSSTSTSASKPTASASNIATSSSTVNS
SVASSAVKVLTPTTNTPLNTASNNKTSSAAANIAVKKISTPKINFVGKYRSGNKLQTTGS
KLEEMKSAESIKTTPAATVQTQEVKPDTAAEAVTPTTLAALQSDVQPVGHDYVEEVRNDE
GKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKM
RKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGP
LXXXXXXXXXXRPGRPPQPQGPAPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSIT
ERALKLVSDNMTDHEKSKNKEGDDKKDGSKDRALKGVLRVGVLAKGLLLRGDRNVNLVLL
CAEKPSKTLLSRIAESLPKQLAVISPEKYDIKCAVPEAAIILNSCVEPKMQVTITLTSPV
IREENMREGDVTSGMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRD
LCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFECISSGIILKGGPGLLDPC
EKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQMNQRFNIHNNRKRR
RDSDGVDGFEAEGKKDKKDYDNF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
agccagcagccagcttcgggtgtagcctattcccatccaactacagttgctagctacact
gtccatcaggcaccagtcgctgcgcacacagttactgcagcctatgctccagcagcagct
acggttgcagtagctaggcctgctccagtannnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ncccaaggtgctgtcgcagctgccgcaacagctgctgcgtatggaggctatcctacagca
cacacagctacagattatggttatacacagagacaacaagaagctccaccaccaccacct
cctgtcactacgcagaattaccaggattcctactcatacgttcgatctactgccccagct
gtagcttatgacagcaaacagtactatcagcagccaacagcaactgtggctgctgctgcc
cagcctcagccttcagtagctgaatcctactaccagacagctccaaaagcaggatatagc
caaggggcaactcaatatacccaagcccagcaaacacggcaagtgacagctataaaacct
gcaaccccaagtccagcaacaactacattttctatatatccggtgtcctctaccgtgcag
ccagtagcagctgcagctactgttgttccatcctatactcaaagtgcaacgtacagtaca
acagcggttacttactctggtacctcttattctgggtatgaagccgcagtgtattcagct
gcatcatcctactaccagcagcagcagcagcaacagaaacagtcggcagctgctgctgct
gcaacagctgcttggacagggaccacctttactaaaaaggcaccattccaaaataaacaa
ctgaaaccaaaacaacctcccaaaccgccccagatccactactgtgatgtttgtaagatc
agctgtgctggaccacagacttataaagaacacttagaaggccagaaacacaaaaagaaa
gaagcagcgttaaaagcgtcccagaacacaaataacagcagcacttctgctcgtggaact
cagaatcaattgcgatgtgagctttgtgatgtgtcttgtacaggggcagatgcctatgct
gcccatatccgtggagccaagcatcagaaagtagtgaagttgcacacaaaacttggcaaa
cctattccttcaactgaaccaaatgtggttacccaagctacttcctcaacatccacatct
gcttccaaaccaactgcctctgcttcaaatatagcaactagcagcagtactgtgaactcc
tctgttgcatcttctgcagtgaaagttcttactcccacgacaaacacaccacttaacacg
gcgtccaacaacaaaacatcttcagctgctgctaatatagctgtaaagaaaatatctaca
ccgaaaataaactttgttggcaagtacagaagtggcaataagcttcagacaacaggaagt
aaactggaagaaatgaaatcagctgaaagtattaaaacaactcctgctgctacagttcag
acacaggaagtaaaaccagacacagcagctgaagcagtaacgcccacaactcttgctgcc
ttgcaaagtgatgtccagccagtgggccatgactatgtggaagaggtaagaaatgatgaa
ggaaaggtaatccgctttcactgtaaactctgtgaatgcagttttaatgaccctaatgcc
aaggagatgcacttaaaagggagacgacacagacttcagtataagaaaaaagtaaaccca
gacttacaagtagaagtaaagcctagtattcgagcaagaaaaattcaagaagagaagatg
aggaaacagatgcagaaagaagaatattggagaaggagagaagaggaggaacgctggagg
atggaaatgaggcgatatgaagaggacatgtactggaggagaatggaggaagagcagcat
cactgggatgaccgtcgcagaataccagatggaggatatcctcatggtcctccaggacct
ctannnnnnnnnnnnnnnnnnnnnnnnnnnnntagaccaggaaggcctcctcagccccaa
ggaccagctcctctacgccgccctgactcctctgatgaccgctacgtgatgaccaaacat
gctgccatatatccaacagaggaggagcttcaagcagtccaaaaaattgtttctattact
gagcgtgctttgaaacttgtttctgacaacatgactgatcatgaaaaaagcaagaacaaa
gagggagatgacaaaaaagatggcagcaaagatagagctttgaaaggagttctgcgagta
ggtgttttggctaaaggtttgttgctccgtggagaccgaaatgtcaatctcgttctcttg
tgtgctgagaaaccttcaaagacgttactcagtcgtattgctgaaagtcttcccaaacaa
ctggcagtaataagtcctgagaaatacgatatcaagtgtgcagttccagaagcagcaata
attttaaattcatgtgtggaacccaaaatgcaagttactatcacactgacatctccagtc
attcgcgaagagaacatgagggaaggagatgtaacctcgggtatggtgaaagacccaccg
gacgtcttggacaggcaaaaatgccttgacgctctggctgctctacgccacgctaagtgg
ttccaggctagagctaatggtctgcagtcctgtgtgattatcatacgtattcttcgtgac
ctctgtcagcgggttccaacttggtctgattttccaagctgggccatggagttgcttgtg
gaaaaagcaattagcagtgctactggaccacagagtcctggggatgcactgagaagagtt
tttgagtgtatatcttcaggaatcatcctgaaaggtggtcctggccttctggacccttgt
gaaaaagatccttttgatacacttgctgtaatgacagatcagcaacgagaggatattact
tcaagtgcacagtttgcactgagactccttgcattccgtcagatacacaaagttttagga
atggatccattaccacaaatgaatcagcgcttcaacatccataataatcgtaaaaggaga
agagacagtgatggagttgatggatttgaagcagaggggaaaaaagacaaaaaagattac
gataacttttaa
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