Colius striatus (speckled mousebird): 104558872
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Entry
104558872 CDS
T08355
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csti03000
]
104558872 (SNAPC4)
03021 Transcription machinery [BR:
csti03021
]
104558872 (SNAPC4)
Transcription factors [BR:
csti03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
104558872 (SNAPC4)
Transcription machinery [BR:
csti03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
104558872 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
SANT_DAMP1_like
Peptidase_M16
Motif
Other DBs
NCBI-GeneID:
104558872
NCBI-ProteinID:
XP_010201922
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
MEREDDSSDDDIESSLPQDPETCLQMNHVYQEVIQEKIEEVELLIAQNKEQQKEIMDELG
GPKAAKAGDGRNLPSNVFLGHFMKPYFKDKTTGIGPPSNEDAKEKAAQGIKSFEQLISTK
WKSREKTLLQKSVVSDRLQRLLQPKLLKMSYWNQKLEKVKTEKEKQILEKQIKEVEQEIE
AINQLPESELLGNRFDEHDWEKISNIHFDGQRSSEELRKFWQNWEHPSINKKEWTEEEIE
RLKKIAAKHGYLDWQTIAQELGTNRTPFQCLQKYQVYNKDLKRKEWTKSEDQMLLELVQE
MRVGSHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLKKGSWTPEEDAMLLAAVKKYGERD
WYKIRTEVPGRSDAQCRDRYLKALHCDVKKGKWSLEEEEQLIELVQKHGLGHWSKIASEL
PHRTGSQCLSKWKLMIGSKKKSGPTKRRHIQESSSSSESSSEEEIELDLTDSSEEETTSK
EECEFPSIDLWVPTQTNTQEANRGRYQTPSLFSPVCADTKSSSSEVPSATCDGDKDRGAE
LNTLLSGIARPHSTDVVVSNPAEVVNKASRCGKQVLRVTLENVRRALRNNTCSQRKLQSK
LKPSATVLTKISEVGAFVGQNLLGQQNITDKTYRQERERWRRMNLDRKLLMAVTPWVGNV
LLPCTLQTGKMAFHQTKADSIQEKIKSVSLVSTPLFTLFLQLFQIDTHGCMKVIRERKLR
QLELIKANAGRPQQASQNVETSAGSSSQPCTQRSSRRGVPRSALRRPVALKARETAAGAE
SSTPAMQGTLPGQVQRQKPKTVSELLREKRLRESRAKKALQRTVFVTPQILVSGPLIIQH
PPQQIIPPAQAESKPAALGCTNSQVQCTPAPLPASTSVAGSTSTAIVLESCSTSVPETGE
SPDSSQGTEQQSNKELKEQPLESKGGVFPGVNLVAAEKAPAQGGCNAQVLAGSSASVVLQ
NQAFVPRQITVVPVGIESGTNKLSLSTPVACEVNSNGPQQRPVNLLPALVAPQTGLPLLP
NSMLPFTWVVTPQALLPTPVVGLPQGLSAAAVTGQCQAAVPAKGNVSSLGLPHVPAGANT
PAPSSTETKAPSAQLAEGVALGQTADHSTLPLPLSSASPVCPTSSVSPAPSDAFPKAPDP
SVAQADAPALQARLLPPTQLPASTQGSDSQSVSSPPNVGESHNSVTANGSSSVTQGTVLQ
PGDPVPQNNILRNSDCSAAQALKHRPIASKPPAVQPADSTPQPTTSSAEKNLLDFSLVSL
EDEALVKEWLSGKQGVQVPPLQTRLPYLPPFLCNLKTLSRLLLQKAALEEQAACLLPSAS
QEGTGVDLHAIGELVQQKLGDNPAYLRLKARFLAAFTLPAVLATLPPPKVTTTLSASRMQ
YEESDEEEWQSEKEASEEESCGNELSGGQLDWTVGDEPGDKDAGLLYQGMGAEENAAESG
ASSCTGVADASAPQIRRSARFRKRRRL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagaagatgacagtagtgatgatgatattgaaagcagtctgccacaggatcca
gaaacatgtctgcagatgaaccatgtgtaccaggaagttatccaggaaaagattgaggag
gtcgagcttctcattgcccaaaacaaagaacaacagaaggaaatcatggacgagcttggt
ggcccaaaggcagcaaaggcaggagacgggagaaacctgccatcaaacgtatttttgggt
cattttatgaagccatactttaaggataaaacaacaggaattggccctccttccaatgaa
gatgccaaggaaaaggcagctcagggcataaaatcctttgaacaactgatttcaacaaaa
tggaaaagcagagagaagacgttattgcagaaatcggttgtaagtgaccgcttgcagcgc
ctgctccagccaaagctgctcaagatgagttattggaatcagaaactggaaaaagtcaag
actgaaaaggagaaacagatcttggaaaagcaaatcaaagaagtggagcaagaaatagag
gcaattaaccagctcccagaaagcgagttgttaggaaacagattcgatgagcatgactgg
gagaagatctcaaacatccattttgatggacaacgtagctcagaagagctgaggaagttc
tggcaaaattgggagcatccaagcatcaacaaaaaggagtggactgaggaggagatagag
aggctaaagaagatagctgccaaacatggctatctggattggcaaaccatagcccaggag
ctggggacaaacaggacacctttccagtgcttgcagaagtatcaagtctataacaaagat
ttgaaaaggaaagaatggaccaaaagtgaggatcagatgcttttagaactggttcaagag
atgagagtaggaagtcacatcccatacaagaaaattgcttattacatggaaggaagagat
tctgctcagctgatttacagatggacaaagagtgtggatcccagcttgaagaaaggatcc
tggacaccagaagaagatgctatgctgttggctgcagttaagaaatatggagagcgtgac
tggtacaaaattcgaacagaagtgccagggaggagtgatgctcagtgcagagacaggtac
ttaaaggcattgcactgtgatgtaaagaaaggcaaatggagtttagaggaagaggagcag
ctaattgagctggttcagaagcatggcctggggcactggagtaaaatagcttctgaattg
ccacaccggacgggctcccagtgtctcagcaagtggaaactcatgattggctctaagaaa
aaatctgggccaacaaaacgacgacacatccaagagagttccagctcttcagagagcagc
agtgaggaggagatagaactggacttaacagacagctcagaggaggagaccacaagcaag
gaggagtgtgaatttcccagcattgatttgtgggtaccaacgcagacaaatacccaggag
gcaaacagaggaagataccagactccatcccttttctctcctgtgtgtgctgacacaaag
agcagcagcagtgaagtgccaagtgccacgtgtgatggagacaaggacagaggtgcagag
ctgaacaccctcctgagcggcatcgcccgcccacattccacggacgtggtggtcagcaac
ccagcagaagtggtgaacaaggcttctaggtgtggaaagcaggtgctgcgggttaccctg
gagaacgtgaggagagcattgagaaataacacgtgttctcagaggaaacttcaatcaaaa
ctaaaaccttctgccactgtgttaacaaaaatatctgaagttggtgcttttgttggccag
aatcttctggggcagcagaacatcacagacaaaacgtatcgtcaggagagagagcgctgg
aggagaatgaacctggacaggaagcttctgatggcagtgactccttgggtgggcaacgtg
ctgctgccttgcaccttgcagactgggaagatggcttttcatcagacaaaagctgattct
attcaagagaagattaagtcagtcagtcttgtgagcactcccctcttcacacttttcctt
cagctctttcagattgacacccacggctgcatgaaggttattcgtgagaggaagctaagg
cagctggagcttattaaggctaatgcaggaaggcctcagcaggcttcccaaaacgtggag
acttctgcaggcagttcttcacagccttgtactcagaggagctcccgaaggggcgtaccg
aggagtgctctcaggagacctgttgccttaaaagcaagagagactgctgctggtgctgag
agcagcactcctgccatgcagggaactctgccaggccaagtgcagaggcagaagcctaaa
actgtctcagagttactgagagagaagcggctgagagagtcccgggctaagaaagctttg
cagaggacggtatttgtcaccccacagattctggtttcagggcctttgataatccagcac
ccaccccagcaaatcattcctcctgcacaagcagagagcaaacctgcagcacttggttgt
acaaatagccaagtacagtgcacaccagctcccttgccagcatctacttctgttgcaggt
tcaacttctaccgctattgtgcttgaaagctgttccacatcagtgccagaaactggggaa
agccctgattcctcacaagggacagaacaacaatccaataaggaactgaaagagcaacct
ttggaaagcaaaggaggggtttttccaggagtgaatctagttgcagcagagaaggcccca
gcccagggagggtgcaatgctcaggtcctagctggtagctcagcttcagtagtgttgcaa
aaccaagcttttgtgccccgtcagatcacggtggtgcctgttggcattgagtctggcacc
aacaagctgtctctttccacccccgttgcctgtgaggtgaatagtaatgggccacaacag
agaccagtcaatctgttgcctgctttagtagctccacagactggtttgcctttgcttccc
aacagcatgctgcctttcacgtgggttgtcacgccccaggctttgctccccacccctgtg
gtgggtcttccccaaggactgtcagctgctgctgtcacaggtcagtgtcaggcagctgtg
cctgccaagggcaatgtctctagcttggggcttcctcatgtaccagctggagcaaataca
cctgcccccagcagtacagagacaaaagcaccaagtgcccagttagctgaaggagtagct
ttgggacagacagctgaccattccacacttcccctgcctctgagctcagcaagtcctgtg
tgccccacgtccagtgtatctcctgcaccttccgatgccttccccaaggctcccgacccc
tctgtggctcaggctgatgccccagccctgcaggccaggctgctgccccccacacagctg
cctgcaagcactcaaggctctgattcccaaagtgtgtcaagtccccctaacgtgggagag
agccacaactctgtgacagcaaatggatcatcttcagtgacgcaagggactgtgctccag
ccgggagatccagttccccagaacaacatcctgaggaactctgattgctctgctgcacaa
gcattgaaacatagacccattgcctccaaacctccagctgtgcagcctgctgacagcaca
ccccagccaaccacttccagtgcagaaaagaacctcctcgacttcagcctggtttccctt
gaagatgaggcactagtgaaggagtggctgagtgggaaacaaggcgtccaggtaccacca
ctgcaaaccaggctgccttatttgccacctttcctgtgcaatttaaaaaccctctcaagg
ctgcttctgcagaaagcagctctagaagagcaagcagcatgtctcctgccttctgccagt
caggagggcacaggggttgatttgcacgccatcggagagctggtgcagcagaagctgggt
gataaccctgcttacctccggctgaaagccagattcctagcagcttttacccttccagct
gtgctagcaactctgcctcctccaaaagtgacaacaactctgtcagccagcaggatgcaa
tatgaagagagtgatgaagaggagtggcagagtgagaaggaagcgtctgaggaagagagt
tgtgggaatgaattatcaggtggacagttggattggacagttggtgatgagcctggagac
aaagatgctggtttactgtatcagggcatgggagctgaggagaatgctgcagagtctggt
gcgagctcctgcactggtgtggctgatgccagtgctcctcaaatcaggagaagtgctcgc
ttcaggaagaggaggaggctgtga
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integrated database retrieval system
