Colius striatus (speckled mousebird): 104559298 Help Entry 104559298         CDS       T08355                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism csti  Colius striatus (speckled mousebird) Pathway csti04382   Cornified envelope formation csti04510   Focal adhesion csti04512   ECM-receptor interaction csti04518   Integrin signaling csti04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:csti00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104559298 (COL4A1)    04518 Integrin signaling     104559298 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104559298 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104559298 (COL4A1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     104559298 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:csti04147]     104559298 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:csti00536]     104559298 (COL4A1) Exosome [BR:csti04147]  Exosomal proteins   Exosomal proteins of other cancer cells    104559298 (COL4A1) Glycosaminoglycan binding proteins [BR:csti00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104559298 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  104559298 NCBI-ProteinID:  XP_010202514 LinkDB All DBs Position Unknown AA seq 1615 aa AA seqDB search MQGPEGPPGPPGLKGDTGEPGLPGTKGTRGPPGASGFPGNPGLPGIPGQDGPPGPPGIPG CNGTKGERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPPSLLKGDKGFPGQPGLP GPPGAPGFQGTMGPQGPPGEPGPPGPPGLPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPG PAPHMKEKGSEIIRGEKGDPGEKGEQGAPGLPGSGFKGEKGEPGKPGPRGKPGKDGEPGP KGEAGLPGGFGIPGRPGEPGTKGDKGERGFPGPPGRVIDGGPVDTFGEKGEPGASGLPGL KGQKGEKGFPGIQGIPGPPGRPLPDRVGSPGVPGERGEKGEKGSPGFPLPGPPGRDGFPG PPGLPGPPGPPGKTDGIDQCQQGEPGAPGRPGLPGRDGFPGEMGEKGDKGESCALCDKVG PPGLPGPQGPPGPAGFPGQSGFKGDRGLPGLDGLPGVPGPPGTPGLMGSPGAKGEPGDFS YDSILKGEKGDPGFPGQPGLPGREGRPGKDGLPGLQGPKGASGTAGLKGERGPPGQPGFP GVRGERGFPGLPGTGAAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLP GPPGFPGPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPG TPGLDGLPGVPGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKGNAGLPGLRGEQGFPGI PGQQGFRGDPGLPGLQGLQGPPGAPGLGPQGSPGPAGQPGPQGPPGFPGIKGERGFPGLP GLDMPGPKGDKGSQGQPGVPGSVGLPGLPGPQGAIGLKGSAGAKGEMGVMGTPGLPGTPG PVGDRGLPGEKGSQGFKGVIGPQGDPGVKGDKGEAGLPGKPGTMDTMDMVSLKGQKGDQG EKGDHGATGEKGLRGEYGEPGIPGRDGEPGTPGHPGPKGDQGPPGYPGDPGIPGQKGSVG EMGLPGTPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPGIGFPGSPGEKGEPGRTGS PGLSGDKGEKGSAGMPGIPGAPGPKGSPGMAGFPGNPGRHGEKGEKGLPGLSGIPGLKGE PGEPGVPGPAGSIGQKGEPGYDGIPGAAGAKGEQGVPGRGLPGFPGAKGDKGAKGDVGFP GSPGSPGIPGLKGEPGFDGPPGPKGNQGLPGLPGSAIEGPKGDRGPQGQPGLPGVPGPTG PPGPPGLKGEKGEQGSNGWPGTPGGPGVKGDPGFQGLPGSPGLPGDIGQKGDLGPPGIPG VPGPKGSPGFPGLKGERGDQGLPGSKGLQGPPGPPGPFQLIKGDPGLPGPVGPVGLKGFP GLPGPKGQQGVTGPSGVPGPPGSPGFDGKPGQKGEVGPYGPPGPRGFPGPPGPEGLPGAM GPPGSPSVAHGFLVTRHSQTTEEPSCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCL RKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCSVCEAP AMVIAVHSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFI ECHGRGTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRKT NT seq 4848 nt NT seq  +upstreamnt  +downstreamnt atgcaaggacctgaaggtccccctgggccaccagggcttaagggtgatactggagaacca ggactgccaggaacaaagggaacaagaggtcccccaggagcatcaggctttccaggaaac cctggccttcccggaattcctggacaagatggccctcccggtccacctggcattccagga tgtaatggcacaaagggtgaaagaggtccagtaggtcccccaggtttaccaggactgact gggagcataggacccccaggacctcctggaatgaagggagatccaggtgaagtgattggt cttttgcctcctagtctgctaaaaggtgataaaggctttcctggccaacctggactacct ggcccacctggagctccagggtttcagggcacaatggggccacaaggacctccaggagag ccaggtcccccagggccaccaggattaccaggcgagaagggctatatgggcttgggcttt cagggtcctaaaggtgaaaagggagaacaaggagtaagaggcccaccgggcccaccagga ccagcaccacatatgaaagaaaaagggagtgaaatcataaggggagaaaagggcgatcca ggtgaaaagggtgaacagggagccccaggattgccaggttcaggtttcaaaggagaaaag ggtgaacctgggaaacctggcccacgtggcaagcctggaaaagatggtgaaccaggacca aaaggagaagctggtttgcctggtgggtttgggattccaggacgacctggagaacctggt acaaagggtgacaaaggtgaacgaggttttccaggacctccaggaagagttatagacggt ggaccagtagatacctttggtgaaaaaggagagcctggagcctcaggtttgcctggactg aaaggccagaaaggtgaaaaaggtttccctggtatacaaggaattcccggacctccaggt cgaccgcttccagacagggtaggatcacctggtgttcctggagagagaggtgaaaaaggt gaaaagggttctccgggattccctttacctggaccacctggaagagatggttttccaggt cccccagggttgcctggcccaccaggtcctccaggcaaaacagatggaattgatcagtgc cagcaaggtgagcctggtgcaccaggtcgtcctggacttccaggaagagatggatttcca ggagagatgggagagaaaggtgacaaaggcgaatcctgtgccttatgtgataaagtggga cctcctggacttccaggaccacaagggccacctggtccagcaggttttccaggtcaatca ggcttcaagggtgacagaggattacctggacttgatggccttccaggagtgcctggccct cctggcactccaggacttatgggcagccctggggcaaaaggagaaccaggagatttttct tatgattctatcctgaaaggtgaaaagggagatcctggtttcccaggacagccaggtctt cctggaagagaaggaagaccaggaaaagatggattgccaggccttcagggtccaaaagga gcatcgggtactgctggcttgaaaggagaacgtggtccccctggccaacctggattccct ggagtacgtggtgaaagaggctttcctggccttcctgggacaggtgctgcagggttacct ggtgacaaaggagacagaggctttgctggaactccaggtttaccaggccttccaggagca aaaggcgaagcaggacgaactgtaccgctccctgggcctccaggggcggatggtcttcct gggccacctggtttccctggcccccaaggtgacaaagggaatcctgggcttccaggtaga cctggcctgccaggagaaaaaggtgctgttgggcaaccaggtatagggttccctggacct ccaggacccaaaggtttccaaggtcagcctggctcgcctggtctgcctggtactccggga acccctggcctggatggtttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacct ggcgtaggtcttcctggccctaagggattgccaggccccccaggcccagctggcatccct ggagaaaagggaaatgcaggactgcctggcttacgtggggagcaaggctttccaggcata cccgggcagcaaggattcagaggcgatcctggcctcccaggactgcaaggtttgcagggc cctccaggcgcaccaggactgggaccgcagggatcaccagggcccgctgggcagccagga ccccagggaccgccaggatttcctggaataaaaggagaaaggggcttccctggtctccca ggtctggatatgccaggaccaaaaggggataaaggtagccagggccagcccggagtacca ggatctgtggggttacccggcctaccaggtccgcagggggccattggactgaaaggatcg gcaggagccaaaggagaaatgggagttatgggaactcctggattgccaggaactcctggg ccagttggagatcgagggttacctggtgaaaagggtagccaaggtttcaaaggtgtaatt ggaccacagggtgatcctggtgtcaaaggagataaaggtgaagccggtctcccaggaaaa cctggaacaatggacaccatggacatggttagtctcaaaggccaaaagggagatcaagga gaaaaaggggaccatggagcaactggagaaaaagggttacgtggggaatacggagaacca ggaattccaggaagggatggtgaacctggtactccaggacatccagggccaaaaggtgat cagggccccccagggtacccaggagatccaggaattccaggacaaaaaggatcagttggt gaaatgggtttgccaggaacgcctggagaaaaaggtctaccaggagtaccaggttcacca ggcacaccagggttccctgggcagaaaggtgaaaaaggagacaaaggagcaccaggtttt cctggaattgggtttccagggtctcctggtgagaagggagaaccaggaagaacgggcagt ccaggtttatctggagataagggtgaaaaaggtagtgctggaatgcctggaattccgggt gccccaggccccaaaggatcccctggcatggcaggatttccaggcaaccctggccgccat ggagaaaagggtgaaaaaggacttcctggcctaagtggtattccaggtctaaaaggagaa ccaggtgaacctggtgttccgggccctgctggttccattggacagaaaggtgaaccaggt tatgatgggattccaggtgcagctggtgcaaagggtgaacaaggtgttccaggtagagga cttccaggatttccaggtgcaaagggagacaaaggtgcaaaaggtgatgtaggttttcca ggatccccgggaagtccagggatcccgggtctaaaaggagaaccaggatttgatggtcca ccaggacctaagggcaaccaaggtcttcctggactaccaggaagtgcaattgagggccct aaaggagacagaggaccccaaggccaacctggtcttccaggtgtaccaggcccaacaggg ccaccaggacccccaggtctgaaaggggaaaaaggagagcaggggagcaatggctggcct gggactcctggaggtcctggagtcaaaggtgatccaggtttccagggactgccaggtagt cctggtttaccaggagatattggtcaaaagggtgatctgggacctccaggaattccaggc gttccaggtccaaaaggatctcctggtttcccaggccttaagggtgagagaggtgaccaa ggtcttcctggatctaaaggcttacaaggcccaccaggcccaccaggtccttttcaactc attaaaggagatccaggcttacctggccctgtaggaccagttggtctcaaagggttccca ggacttccaggtcccaaaggacagcaaggggtgacagggccttcaggtgtacctggacca cctggtagtccagggtttgatggtaaacctgggcaaaaaggagaagttggtccttatggt cccccagggcccagaggattccctggtccacctggccctgaaggtttgcctggtgctatg ggcccaccagggtcaccgtctgttgctcatggcttccttgttaccagacacagtcaaact actgaagaaccatcatgtccatttggaacaaggctgatttaccatggctactccttgctt tatgtacaaggcaatgaaagagcacatgggcaagatctgggcacggcaggaagctgtctt cgtaaatttagtaccatgcctttcttgttctgcaacatcaacaacgtttgtaactttgca tcaaggaatgactattcctactggctgtccactcctgaacccatgccgatgagtatggct cctatcaccggggataacatcagaccattcatcagcagatgctctgtatgtgaagctcct gctatggtaatagctgttcacagtcaaacaattcaaataccaccgtgtcctgaaggctgg agttcactttggattggttactcctttgtcatgcacaccagtgctggtgcagagggctct ggccaggccctggcgtctcctggttcctgcctggaggagttccgcagcgctcctttcatt gaatgccatggccggggcacctgcaattattatgcaaatgcttacagcttctggcttgcc actatagagaggaatgagatgttcaagaaaccgactccctcaactttgaaagcaggggat ctgcgctcaaatgttagccgttgtcaagtctgtatgagaaaaacataa

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