Colius striatus (speckled mousebird): 104559698
Help
Entry
104559698 CDS
T08355
Symbol
PKD1
Name
(RefSeq) polycystin-1
KO
K04985
polycystin 1
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csti03037
]
104559698 (PKD1)
04812 Cytoskeleton proteins [BR:
csti04812
]
104559698 (PKD1)
04040 Ion channels [BR:
csti04040
]
104559698 (PKD1)
04091 Lectins [BR:
csti04091
]
104559698 (PKD1)
Cilium and associated proteins [BR:
csti03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104559698 (PKD1)
Cytoskeleton proteins [BR:
csti04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
104559698 (PKD1)
Ion channels [BR:
csti04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104559698 (PKD1)
Lectins [BR:
csti04091
]
C-Type lectins
Others
104559698 (PKD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD
REJ
PKD_4
LRR_8
Lectin_C
Y_Y_Y
LRR_4
WSC
PKD_3
LRR_5
K319L-like_PKD
Motif
Other DBs
NCBI-GeneID:
104559698
NCBI-ProteinID:
XP_010203093
LinkDB
All DBs
Position
Unknown
AA seq
2894 aa
AA seq
DB search
DLSKNKISGLDVQMFESLTSLAKLDISHNKISTLEDGIFDNLFNLTEINLSWNPFVCDCK
LSWLPRWVEDRKVRVIQASDTRCAHPPEVANLSLFDVSFVNTTCGAQYISCLTNNDTEET
ELVILFTSVHPGNLTEETCSALCYAKDQEYGGFSTQGQCLCGTAHKTNSSIGCLPFCTEH
LSGQACDGPSLIPSPFQAQLSVSFIGLQPRYSLHQAVLFNVSIPIAVSTLLWEFGDQTVL
NTTGNTAIHMYALPGQYNVTVSIFVGTKVSDVQAEIEVVASPQQLELQCPSLVKTNESLD
IRIRNRGGTGLAVLYSITAEAGELGRAVHPMCPTDGLVFLGNNHCYRLVVEKAEWWEAQQ
HCQEHGNGELAFVSSPEIQSFLVTHVIRSLDVWIGFNDFASTGAQQRGEGFNLESCQNWL
PGEPHPSNADHCVRMGPTGQCNTDLCMAKHSYVCEYKPKGVLLNAENFFVGDPAFDTHEA
VKNVTEDNGLSAPWRAVEVMVFPELAFRHEGYLSALEFVTQELHQPVQVRFQVHRRIDEE
DYQEGRNATELFFAAQDDGNWTLVECPPGFQWCHLTNLCSPLNNCCNATECANSSLASSR
TPISLQHNESHLSYELIKEFHFTVPAGPSSHYLVTFRKENIFVRAEDVFSIQHNAALGLL
LQCRPSTTSPYRTSVLSTDSSELALGLLDGSVGVTWRNSTVCHLRVRYAEEQLVPLISPH
NAGLEHPGRYTVRASVDSGVFSANLSCSFQVASRVSGLRVIHPPPQGSRVYLPSNHTTLL
VKLSSGVNATASWLGDNRTFPFEGSCPAAFAPLTAHCAQETNDTWFAVVSLSGLREGVST
HVLVAENSVSSQNITITVKVEEPIRGLRATPDPESRVLLNTRVSYVPVMEAGSDVTFRWT
VDDKPSFTFYNVVFNVIYQSPAVYKLSLTASNHVSNFTVNYNVTVEMRNKMKNLTVLGVL
PVLPQNKTVELTARVQVDSAVDAKFLWDFGDGIQETYLFKPPYNKSFLVPDPSVHEVVIE
HNVSHVYQDPGEYALVVLVSNQFENLTHFTPVHVHSSLIDVKVEAEENVLVVSRPVTFRA
SPLPSLTWDFGDGSSLFTETQPTVMYSYPRRGVYNITLTANNTISSVRTVECYQVFEEIT
GLRVSADEATELGASVTLNASVQTGDSITWIFDMGDGTVLRSRVPVVEHVYVKDINCTVN
VTAVNPVNSVSQTVPVRVFVLEVLKIEPASCIPEHPDVQLTAYVTGNPEEYIFDWTFGDG
SSNITIIGDPVVMHNFTRSGTFPLSLTLSSRFNKAHYFTTVCVEPEIVNVTLLPPKQFVR
LGEESSFQVSAVPLYQYRYRWDFGNNESTRSSGTEVTYTYKNTGVFLVTVTVSNNVSFNN
DTAFVEVQEPVGVAKIEYNGTDVLELNQIYLFSASMNGTKVSYCWDFGDGTTQPGQIATH
SYNNTGHYTISVVGRNDVSFNETIIDVTVKRRLQGLTINASRTVVPLNGSVSFVATLVSG
SAIRYSWILCDRCTPIQGSSTISYTFRSVGTFNVIVTAENKISSLQDSIYVYVLEQIEGL
QVASSDLVEDVYFPTNKTLHLQAVVREGTNISYSWVAQRDGNAVQTSTGKTFSLSIPEAG
NYTIYLKATNMLGCATANKTLEFIESIGILKPYAFPNPIAVNASVNISTTITSGSGITYV
WYLEDGFSHVTSDPFIIYSFQSPGVMEVIIQAENKLDSTNATVSVYVEEVIEGLSIGTAE
LDCRYVSSGSTVVFEGELQKGTEVTWLWEVPNGTLTGQSVAVTFPTAGFYTVYLNASNDI
SWALARRNISVLDRIQGLEVLASKKVVEPGEQVTFVIRMLSGTSVSYLVSISGDYSVVLN
GSKYTHEFTESGDYLVTVTVQNQISIAHAEVLISVLEAIHGVRLLNCCEEGIATGTEKSF
SAQVGSGSRVSFSWQFSLWKERGRSVVTAAGESVSYTPEAAGLLEIHLNAFNDLGGVNIT
RTIQVQDPIIQVSLTASNAFVNRTALFEAAVMPSSRTVEFLWTFGDGSATQTTRVAVANY
SYLSPGDYLVEVNATNLISFFIAHLTVTVKVLECEEPEVELALPPQVVMKRSQRNYLEAQ
IDLRGCIKYQTEHLWEIYQASSCINLDDSSRIRLPNVDVNRPQLVIPKLALEVGNYCFVF
IVSFGDTPLSKSIFANVTVIPSKLVPIIDGGSYRVWSNTQDLVLDGEKSYDPNLDDGEQT
PLLYDWSCTSSSKSSAAGCSLNFSAKEGIVTISKAVLEADVEYTFDLTVRKEGMSPEATN
QTVFIKRGGVPIVSLECVSCKAQSVYEVSKSSYVYLEGTCQNCHNDSKLGRWAAHSFKNK
SLILDKRTTSTGDTGMNLVLRQGALKDGEGYTFTLHITDLTTGEEGFASIDLLPNQPPVG
GSCRLFPKGPLRALMAKVHFECAGESVRTVVLYILLVSRRRDGHYHEFCVYKGSRAEHSA
FLPPGFHESGFVVSVSVLVQDQLGATVVAVNRSMEIGLPEGFPSLSHWLYNQTDTVLQGL
VKQGDPQQVIEYSLALITILNEYERSVLLEPETANEFELRTWTRNNITETLNSLNVNTVD
DIQQISAALAQCTVVSKELVCKSCLTRTLNKLETMMTILQGETTQGTVTPTRIADNILNI
TGDLIHLVNTVSQEAKPQELLADSHNLLLAPKAYNLSSSLMRILMKSRVLNEEPLELVGG
EIKATGKRSDPFNLLCYENTPNCQFSIPQAFNTTLSNLTDVIQVMFQVDSNPFPFGYISN
YTVSTKVASMEFQTHNGVQIPIGSLDSEKAITVMVSNNTDSDNLSAGTEVIEARTSVNLI
VTMESNNREAGLHFQLTYRVLNDHYLASEPEPFIMAYLHHEPEPNEHNCSASKKIGLDAL
AGSDHKLYTFFTSP
NT seq
8685 nt
NT seq
+upstream
nt +downstream
nt
ggatctttccaagaacaagatcagtggtttagacgttcagatgttcgaaagcctgacttc
tctggcaaaactagatataagccacaacaagatttctacattagaagatggaatatttga
taatttatttaatttaactgaaataaacttaagttggaatccatttgtttgtgactgcaa
actttcctggttgccccgttgggtggaagacagaaaagtgagagttattcaggcatcaga
cacgagatgtgctcaccctcctgaggtggcaaacctttccctctttgatgtctcctttgt
caatactacttgtggagctcaatacatatcgtgtctgacaaacaatgacacagaggagac
tgagcttgtcatccttttcacatctgttcaccctgggaacctcactgaggagacttgcag
tgcgctctgttatgccaaagaccaggaatatggaggtttcagcacccaggggcagtgttt
gtgtggtactgcccacaaaacaaactcttccatcggttgtttgccattttgcactgagca
tttgtccgggcaggcctgtgatggcccatcactcatcccctctcccttccaggcacagct
gtctgtgtcttttatcggactccagccccggtacagcctacaccaggccgtgctcttcaa
tgtcagtattcccattgctgtcagcactttactgtgggaatttggggaccagacagttct
caacaccactggaaatacagctatccacatgtatgccttacctgggcagtacaatgtcac
tgtctccatctttgtgggcaccaaggtctcagatgtgcaggcagaaattgaggtggtggc
ttcaccccaacagttagaactacagtgtccttccttggtcaagacaaatgagagtctgga
catacggatccgcaacagaggtggcactggcctggcagtgctgtacagtatcactgcaga
ggccggagagctgggcagagcagttcaccccatgtgccccacggatggcttggttttcct
gggcaataaccactgctatcggctggtggtggagaaggcagaatggtgggaagcccagca
gcactgccaggagcacggcaatggagagctggcttttgtgagcagcccagagatccagag
cttcttggtcactcatgtcatcaggagccttgatgtctggattggattcaatgattttgc
aagcactggagcacagcaaagaggtgaaggatttaatctggagagctgtcagaactggct
gccaggagaaccccatccgtcaaatgctgaccactgtgtccggatgggcccaacgggcca
gtgtaacacagacctgtgcatggccaagcacagctacgtctgcgagtacaagcccaaagg
agttctcttaaatgctgaaaacttctttgtgggagaccctgcatttgacacacatgaggc
tgtgaagaatgtgacagaggataatgggctgtcagctccatggcgagctgtggaggtgat
ggtgttccctgagctggccttcaggcatgaggggtatttgagtgccctggagtttgtgac
acaggaactgcatcaacctgttcaagtgaggttccaggtgcatagacggatagatgaaga
agactaccaggagggaagaaatgctacagaactattcttcgctgctcaggatgatgggaa
ctggacattagttgaatgtcctcctggtttccagtggtgtcatttgactaatctgtgctc
gccactaaacaactgctgcaatgcgaccgagtgtgccaacagttctcttgccagcagccg
tacccccatttcccttcagcacaatgaaagccatctcagctatgaactcatcaaggaatt
tcactttacagtaccagctggtccttcttcccactatctggtcacatttagaaaagaaaa
tatttttgtcagggctgaggatgtcttcagtatccagcacaacgcagccttggggctgct
cctgcagtgccggccgagtaccacatccccttacagaaccagcgtcttaagcacagactc
ttcagagttggcacttggcctgttggatggctccgttggtgtcacctggagaaacagcac
tgtgtgtcacctccgagttcgctatgcagaggagcagctggtcccgctgatcagccccca
caacgcggggctggagcatcccggtcgctacacggtcagagccagcgtggacagcggagt
cttcagcgccaacctgtcctgcagcttccaggtggcttcccgggtgtcaggcctgcgtgt
catccacccccctcctcagggcagcagggtctacctgccctccaaccacaccaccctgct
cgtcaaactctcgtcgggggtgaacgcgacagccagctggctgggggacaaccgcacctt
ccccttcgagggctcctgcccagccgcttttgcaccgctgacagctcactgtgcccagga
gaccaacgacacctggttcgctgtggtcagcctgagcggcctcagggagggagtaagcac
ccacgtgcttgttgcagagaactccgtgagctcccagaacatcaccatcacagtgaaagt
ggaggagcccatccgcgggctgcgggccacccctgaccctgagagcagagtcctgctaaa
tacacgagtgagctacgtgcctgtgatggaagctgggtcagatgtgactttccgatggac
agtagatgataagccatctttcactttttacaatgttgtcttcaacgttatctaccaaag
cccagctgtgtacaagctttcgctcaccgcctccaaccacgtcagtaactttacggtcaa
ttacaatgtcacggtggagatgaggaataagatgaagaacctgactgtgttgggtgtcct
gccagtcctccctcagaacaagaccgtggagcttacagcaagagttcaggttgattcagc
tgtggatgctaagttcctgtgggattttggagatggcatccaggagacatacctgttcaa
gcctccctacaacaagtctttccttgttcctgatcccagtgtccatgaggttgtaattga
gcacaatgtttcacacgtctatcaagacccaggtgaatatgccttggtggttcttgtctc
aaaccagtttgagaacctcacccactttaccccagttcacgtccacagctctctgattga
tgtgaaggtggaagcagaggagaatgttttagttgtgagccgtccggtcaccttcagagc
cagcccattgccgtctctcacttgggactttggggatgggtcctcactgttcacagagac
ccagcccacagtgatgtacagctaccccaggagaggggtatacaacatcaccctcacggc
aaacaatactataagcagtgtgaggacagtggagtgctaccaagtgtttgaagagataac
tgggctccgtgtttctgcagatgaggcaacagagctgggagcatctgtgaccctcaatgc
ttcagtgcagactggggacagcatcacctggatatttgacatgggggacgggacggtgct
gaggagtcgggtgccagtggtagaacatgtgtacgtaaaggacatcaactgcaccgtgaa
cgtgacagctgtcaatcctgtgaactctgtctcccaaaccgtgcctgttcgtgtctttgt
cctggaagtactcaaaatagagcctgcttcctgcatccctgagcacccagatgtgcagct
cactgcgtatgtgacggggaatcctgaggagtacatctttgactggacttttggagatgg
ctcatccaacatcacaatcattggggaccctgtggtgatgcacaacttcacccgaagtgg
gacattccccctctccctgactctctcaagcaggtttaacaaggctcactatttcaccac
tgtctgtgtggagccggagatagtcaatgtcacccttctccctcccaagcagtttgtgag
gctgggtgaggagagcagcttccaggtcagcgctgtgcccctctaccaataccgctaccg
ctgggatttcgggaacaacgagtcaactaggtcaagtgggactgaagtgacctacaccta
caagaacacaggggtcttcctggtcaccgtgactgtctccaacaatgtctcgttcaacaa
tgacacggcgtttgtggaagtccaggagccagttggggtggcaaagattgagtataatgg
gacagacgttttggagctgaaccagatctacctgttctctgccagcatgaacggaaccaa
agtgagttattgttgggactttggggatggcactacccagcctgggcagattgctaccca
ctcctacaacaacacgggccattacactattagtgtggtgggccggaatgatgtcagctt
taatgagaccatcatcgatgtcaccgtgaagcgtcggctccaagggctgaccatcaatgc
cagcaggacggtggtgccattaaacggttcggtgagcttcgtagccacacttgtatctgg
cagtgccatccgctactcgtggatcctctgtgatcggtgcactcccatccaaggctcctc
cacaatttcctacactttccggtctgtgggcacgttcaatgtcattgtgacagcagagaa
caagatcagctccttacaggacagcatctatgtctacgtgctggagcagatcgaaggcct
gcaggtggccagcagtgacctggtggaggacgtgtatttcccaaccaacaaaacactcca
cttgcaggcagtggtgagggagggaacaaacatctcttacagctgggtagcccagaggga
tggcaatgctgtgcagacctccactgggaaaaccttctccttgagcatcccagaggctgg
aaactacactatctatctgaaagccactaatatgctgggatgtgcaactgctaacaagac
actggagtttattgaaagtattggtattttaaagccttatgcattccctaacccaattgc
tgttaatgcctctgttaacataagtaccaccataactagtggcagtggcatcacgtatgt
gtggtacctagaggatggtttctctcatgttacctctgatccctttattatatactcctt
ccaaagccctggagtgatggaggtcatcattcaagcagaaaacaagctggattcaaccaa
tgcaacagtctctgtctatgtagaggaggtcatagaggggctgagtataggaactgcaga
actggactgcagatatgtctcatcaggctccacagtggtctttgagggggagctgcagaa
agggaccgaagtgacatggctttgggaggtgccaaatggcacattgaccggccagtccgt
ggcagtcacgttccccacagcagggttttatacagtctatctgaatgcatcgaacgacat
cagctgggctctggcccgcaggaatatctcagtgctggacaggattcaaggactggaggt
tcttgccagcaagaaggtggtggagccgggggaacaggtcacttttgtgatcaggatgtt
gtcaggtacctctgtaagttacttggtgagcatcagtggcgactactctgtggtgctcaa
cgggtccaagtacacacatgagttcactgagagcggtgattatttggtgaccgtgacagt
gcagaaccaaatcagcattgcacacgctgaggtgctcatctctgtcctggaggccatcca
tggtgtcaggctcctgaactgctgtgaggagggcatagccacgggcacggagaagagctt
cagcgcccaggtggggagtggctcccgtgtgtcattctcctggcagttctccctgtggaa
agaacgaggtcgatctgtggtcactgcggcgggagagagtgtttcctacactccagaagc
tgcagggttgcttgagattcacctcaatgccttcaatgacttgggaggtgtcaatatcac
cagaaccatccaggtccaagacccgataatccaagtgtccctcactgcctccaatgcctt
tgtcaacaggacagcactgtttgaagcagcagtgatgcccagcagcaggaccgttgagtt
cttgtggactttcggggatggctctgctactcaaacaaccagggttgcagtggccaacta
ttcttacctgagccctggggattacttggtggaggtgaatgccaccaatctcatcagctt
cttcatagcccacctcactgtaactgtcaaagtcttggagtgtgaggagccagaggtgga
gttagccttgccccctcaagtagtcatgaagcggtctcagaggaactacctggaggcaca
gattgacctccgaggatgcatcaagtaccagactgagcacctgtgggagatctaccaagc
gtccagctgcatcaacttggatgactccagcaggatccgtctgccaaacgttgatgtgaa
caggccccagctagttataccgaagcttgccctggaagttgggaactattgctttgtctt
tattgtctcctttggagataccccactgtccaaaagcatctttgccaatgtaactgtaat
accgagtaagctagtgccaatcattgatgggggatcatatcgtgtatggtccaacactca
ggacttggtcttggatggggagaagtcctatgacccgaacttggatgatggtgaacagac
tccgttgttatatgactggtcttgtacatcctcctccaagagctcggctgcagggtgctc
tctgaatttcagtgccaaggaaggaattgtcacaatttccaaagctgtattagaagcaga
tgtggagtatactttcgacctcaccgtcaggaaggagggtatgagtcccgaggcaacaaa
tcaaaccgtatttatcaagaggggaggagtccctattgtgtccctggagtgtgtttcctg
caaggctcaatctgtctatgaagttagcaagagctcctatgtctacctggaggggacttg
ccagaactgtcacaatgactccaaacttgggagatgggcagcacacagctttaagaacaa
atctctcatcctggacaaaagaactacctccactggcgacacgggaatgaacctggtcct
caggcaaggggcgctgaaggatggggaggggtatacttttacccttcacatcacagacct
gacaacaggggaggaaggattcgcctccatcgatctgctccccaaccagccacccgtggg
aggatcctgccggctgtttcccaagggccccctccgggccctgatggcaaaggtgcactt
tgagtgtgcaggtgagagcgtacggaccgtggtgctgtacatccttctggtgtcccgccg
cagggacggccactaccacgagttctgcgtgtacaaggggagccgtgccgagcacagcgc
cttcctgcccccgggctttcacgagagcggcttcgtggtgtccgtgtcggtccttgttca
ggaccagctgggagcgaccgtggtggccgttaaccgctccatggaaattggcttacccga
gggcttccccagcctctcccactggctctacaatcaaactgacaccgtgctccagggctt
agtgaaacaaggagaccctcaacaggtcattgagtactctctggccctcatcaccatctt
aaatgagtacgagcgctctgtgcttctggaacctgagactgcaaatgaatttgaactccg
gacctggacccgcaacaacatcacagagaccctgaactcgctgaacgtgaacacggttga
tgatatccagcagatctcggctgccttggcgcagtgcacggtggtgagcaaggagctggt
ttgcaagtcctgcctgacaaggaccttgaacaagctggagaccatgatgactattctgca
aggggaaacgactcagggcactgtcacgccgactcgcattgctgacaacatcctcaacat
cacaggtgacctaattcaccttgtgaatacggtttcacaagaagccaagccccaggagct
gcttgctgactcccacaatttgctgctggctcccaaagcctacaacctgtcttccagcct
gatgcgcatcctcatgaagtctcgagtgctgaacgaagagccccttgagctggtgggagg
agaaattaaggccacaggcaaacgatctgatccctttaacttgctttgctacgaaaacac
accaaactgccagttctccatcccccaggcattcaacaccaccctttccaacctgacaga
tgtcattcaagtcatgttccaggtggactccaatcctttcccttttggttacatcagtaa
ctacaccgtgtccacaaaggtcgcctccatggagtttcagacacacaacggggtgcagat
ccccattgggagcctggactctgagaaagccatcactgtcatggtgtcaaacaacacaga
ttctgacaatctctctgctggcacggaagtcatcgaggcaagaacatccgtgaacctcat
tgtgactatggagagcaacaacagagaagcaggactgcacttccagctcacttacagagt
cctgaacgatcactaccttgcaagtgagcctgagccgttcatcatggcttatctccatca
tgagccagagcccaatgagcacaactgcagtgcctctaagaaaattggcctggatgccct
ggctggaagtgaccacaagctctacaccttcttcacctcacccag
DBGET
integrated database retrieval system
