Colius striatus (speckled mousebird): 104559850
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Entry
104559850 CDS
T08355
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104559850 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csti03041
]
104559850 (PRPF8)
Spliceosome [BR:
csti03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104559850 (PRPF8)
Complex C
U5 SnRNP specific factors
104559850 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Motif
Other DBs
NCBI-GeneID:
104559850
NCBI-ProteinID:
XP_010203287
LinkDB
All DBs
Position
Unknown
AA seq
2242 aa
AA seq
DB search
YAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLFPPALKYMPHAVLKL
LENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFK
RMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNG
STYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPL
VRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKT
EDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGI
ALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHR
PPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNF
NLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIF
AHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMR
GITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIK
QNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIR
RGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRF
SPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIK
RHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKP
ADTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVD
HNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMA
GPPQMPNDFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNN
ENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDN
PNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHN
RVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIG
LNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEED
QLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTL
FQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVE
GILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTI
NRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELD
ALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWI
DIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGS
KPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDD
TNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTA
EEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKF
GDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTIT
EPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQ
RQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAAN
LHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEI
RCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMAD
NPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQML
LSDRFLGFFMVPAQGSWNYNFM
NT seq
6727 nt
NT seq
+upstream
nt +downstream
nt
tacgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggacatgccccccgag
cacgtccgcaagatcatccgcgaccacggcgacatgaccaacaggaagttccgtcacgac
aagcgcgtttatctttttccccctgctctgaagtacatgcctcacgctgtcctgaagctc
ttggagaacatgcccatgccctgggagcagatcagagacgttcctgtcttgtaccacatc
acaggagccatctcctttgtcaatgagattccctgggtcatcgagccagtgtacattgct
cagtgggggtccatgtggattatgatgaggcgagagaagagggacaggcggcacttcaag
aggatgagattccccccctttgatgatgaagaacctcctctggattatgctgataacatc
ctggatgtggagcccctggaagccattcagcttgagctggatccagaggaggatgcccca
gtgctggactggttctatgaccaccagccactgaaagacaacaggaagtatgtgaatggt
tcaacataccagcgttggcagttcactctgcccatgatgtccacgctctaccgactggcc
aaccagctgctcaccgacctcgtggatgacaactacttctatttgtttgacctgaaagca
ttctttacctccaaagctctgaacatggccattcctggaggtcccaagtttgagcctctt
gttagagacatcaacctccaggatgaagactggaacgaatttaatgacatcaacaaaatc
atcatcaggcagcccatcaggacagagtacaaaatcgctttcccttacctgtacaacaac
ctcccacaccacgtccacctcacctggtatcacacaccaaacgttgttttcatcaaaaca
gaagatcccgatctcccggctttttacttcgatcctctcatcaaccccatttcacacaga
cattctgtcaagagtcaggagccgttgcccgacgacgatgaagaatttgagttgccagag
tttgtggaacctttcctgaaggataccccactctacacagacaacacagccaatggcatt
gccctgctgtgggccccacgacccttcaacttgagatctgggaggactcggagagctctt
gatatcccactggtcaagaactggtatcgtgagcactgcccagctggccagccagtgaag
gtgagagtctcctaccagaagctactcaaatactatgtgctgaatgcactcaagcacaga
cctcccaaggcccagaagaagaggtacctgttccgctccttcaaggccaccaagtttttc
cagtcgacgaagctggactgggtggaagtgggcctgcaggtgtgtcgccagggctacaac
atgctcaacttgctgatccacagaaagaacctgaactaccttcacttggattacaacttc
aacctgaagcctgtgaagaccctcaccactaaggaaaggaagaagtctcgctttgggaac
gctttccatctgtgccgcgaggttctgcggctcaccaagctggtggtggacagccacgtc
cagtacaggcttgggaatgtggatgcatttcaattggctgatggcttgcagtacatcttt
gcccacgtgggtcagctgacaggaatgtaccgatacaagtacaaactaatgaggcagatt
cggatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcctgtgggc
aaaggtcctggctgtggcttctgggctccaggctggagagtgtggctgttcttcatgagg
ggcatcacaccactgctggaacgctggctggggaatctgctggccaggcagtttgaaggc
cgtcactcaaagggtgtagcaaaaactgtcacaaagcagcgtgtggagtctcactttgac
ctggagctgagggcagctgttatgcatgacattttggacatgatgccagaaggaatcaaa
cagaacaaagccagaacaatcctgcagcatctgagtgaggcctggaggtgctggaaggcc
aatatcccctggaaggtgccagggctgccaactcctattgagaacatgatcctgaggtat
gtgaaggcaaaagctgactggtggacaaacacagctcactacaaccgggagcggatccgc
cggggtgccacagtagacaaaaccgtctgcaagaagaacctgggtcgactgaccagactc
tacttaaaagctgagcaggagcggcagcataattacttgaaggatgggccctacatcacg
gcagaagaggctgttgctgtgtacacgaccacagtgcactggctggaaagcaggaggttc
tcacccattcctttccccccactgtcctacaagcatgacaccaagttgctcatcttagcc
ctggagaggctgaaggaagcttacagtgtgaagtctcgtctgaatcagtcacagagagag
gagttgggcttgattgaacaggcttatgataatcctcatgaagctctgtccagaatcaaa
cgacaccttttaactcagagagccttcaaggaggtgggtatcgagttcatggatctctac
agccacttagttcctgtttatgatgttgagcccttggagaaaatcacagatgcttatctg
gatcagtacctgtggtatgaggctgataaacgaagactcttccctccgtggatcaaacct
gctgacactgaacctcctccactgttggtgtacaagtggtgccaaggcattaacaacctg
caggatgtttgggaaacaagcgaaggtgaatgcaatgtgatgctggagtctcggtttgag
aagatgtatgagaagattgacctgacgttgctcaacaggctgttgcgtctcatcgtcgat
cacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaaggacatg
aatcacaccaactcctatggcattattcgtgggctgcagtttgcatccttcattgtgcag
tattatgggctcgtgatggacctgctggtgctggggctgcaccgtgccagtgagatggct
gggcctccccagatgccaaatgacttcctcagcttccaggacattgccactgaggttgcc
catcccattcgcctcttctgcagatacattgaccgtattcacatcttcttcaggtttaca
gcagatgaggccagagacttgattcagcgctacctgacggagcatccagaccccaacaac
gagaacatcgtgggctacaacaacaagaagtgctggccccgggatgctcggatgcgcctc
atgaagcacgacgtgaacctcggccgtgctgtgttctgggacatcaagaaccgtttgcct
cgctcagtcaccacagtgcagtgggagaacagctttgtgtctgtgtacagcaaagacaac
cccaatctgctcttcaacatgtgtgggtttgagtgtcgcatcttgcccaagtgccgcacc
agctacgaggagttcacccacaaggatggggtctggaacctgcagaatgaggtcaccaag
gagcgcacggctcagtgcttcctgcgggtggatgatgagtccatgcagaggtttcacaac
agagtgaggcagatcctcatggcatcaggctccacaaccttcactaagattgtcaataaa
tggaacacagctctgattggcttgatgacctatttccgagaggctgttgtaaatactcag
gagttacttgatttgctggtgaagtgtgagaataaaatccagactcggatcaaaattggg
ctgaactccaaaatgcccagtcgtttcccacctgtggtgttttacacccctaaagagctg
ggagggctgggcatgctgtccatgggccacgttctcatcccacagtctgacctgaggtgg
tccaagcagactgatgttggcatcactcacttccgctcaggaatgagccacgaggaggat
cagctcatcccaaatttgtatcgttacatccagccttgggaaagtgaattcattgactct
cagagagtgtgggcagagtatgccctcaaacgacaggaggctatagcccagaacaggcgc
ctgacgctggaggatctggaggactcgtgggacagggggattcctcgcatcaacaccctg
ttccagaaggaccggcacaccctggcctatgataaagggtggagggtcaggactgacttc
aaacagtatcaggtcctgaagcagaaccccttctggtggacacaccagcggcacgatggc
aaactctggaacctgaacaactaccgcacggatatgatccaggctcttgggggagtggaa
ggaatcctggagcacactctcttcaagggcacttatttccccacttgggaaggtctcttc
tgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaatgcccag
agatcgggtttgaaccagattccaaacagaagattcaccctctggtggtctcctaccatt
aacagagccaatgtgtatgttgggttccaggtgcagctggatttgacaggcatctttatg
catggcaagatccccacactgaagatttctctcatccagattttccgagctcacttgtgg
caaaagatccacgagagcattgtcatggatttgtgtcaggtgtttgatcaagaactggat
gctctggagattgagacagtgcagaaagagacaatccatcccaggaagtcatacaagatg
aattcctcatgtgcagatatccttctctttgcttcctataagtggaatgtgtcacgtcca
tcattgcttgctgattccaaagatgtgatggacagcaccaccactcagaagtactggatc
gacatccagctgcgctggggtgattacgattcccacgacatcgagcgctacgcgagagcc
aagttcctggactacaccacagacaacatgagcatctacccatcacccactggagtgctc
attgccatcgacctggcctacaacctgcacagtgcttatgggaactggttccctgggagc
aaacctctgatccagcaggctatggccaaaatcatgaaagcaaaccctgcgctgtacgtg
ctgagggaacggatccgtaaggggctgcagctgtactcctctgagcccacagagccatac
ctctcctcccagaactatggggagctcttctccaaccagatcatctggtttgtggatgac
accaacgtgtacagagtgaccattcacaagacttttgaagggaatttgaccacaaaaccc
atcaatggagccattttcatcttcaatcccaggactggacagctcttcttgaagatcatc
cacacgtctgtgtgggcaggacagaagcgtctgggacagctggccaagtggaagactgct
gaggaagtggctgctttgattcggtcacttcctgtggaggagcagccaaagcagatcatc
gtgactcggaagggcatgttggacccactggaggtgcacttgctggatttccccaatatt
gtgatcaagggctcagagctgcagctgcccttccaggcctgtctcaaagtggaaaagttt
ggtgatctcatcctgaaggctactgaaccccagatggttctcttcaatctctatgatgac
tggctaaaaaccatctcttcctacacagcattctctcgtctgatcctgatcctccgggct
ctgcacgtcaacaatgaccgagccaaagtgatcctgaagccagacaagacaaccatcaca
gagcctcaccacatctggccaaccctgactgatgaggagtggatcaaggtggaggtgcag
ctcaaagatctcatccttgctgactatggcaagaagaacaacgtgaacgttgcgtccctg
acacagtctgagatccgagacattatcctgggcatggagatctctgccccctcccagcag
agacagcagattgcagagattgagaagcaaaccaaggagcaatcccagctgacggccacc
cagacccgcaccgtcaacaaacacggggacgagatcatcacctccaccaccagcaactac
gaaacccagaccttctcctccaagactgagtggagagtcagagccatttctgctgccaac
ctccacctccggacgaaccacatctatgtttcatcagatgatatcaaggaaacaggctac
acctatattctccccaagaatgtcttgaagaaattcatctgtatctcagacctacgggcc
cagattgcaggttacctgtatggagtgagcccccctgataacccccaagtgaaggagatc
cggtgcatcgtgatggtgcctcagtggggaacacaccagactgtgcatctcccagggcag
ctgccacagcatgaatatctcaaggaaatggaacctctggggtggattcacacccaaccc
aacgagtcccctcagctttcaccacaggatgtcaccacccacgccaaggtcatggctgac
aacccctcctgggatggggagaagaccattatcatcacctgcagttttaccccagggtcc
tgcactctgacagcctacaaactgacccccagcggctacgagtggggcaggcagaacaca
gacaagggcaacaaccccaagggctacctgccctcccactatgagagggtgcagatgctg
ctctcagatcgcttccttggcttcttcatggtcccagcacaaggctcctggaactacaac
ttcatgg
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integrated database retrieval system
