Colius striatus (speckled mousebird): 104559947
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Entry
104559947 CDS
T08355
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04150
mTOR signaling pathway
csti04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104559947
04150 mTOR signaling pathway
104559947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csti04131
]
104559947
Membrane trafficking [BR:
csti04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104559947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
104559947
NCBI-ProteinID:
XP_010203430
LinkDB
All DBs
Position
Unknown
AA seq
1462 aa
AA seq
DB search
MYWTDWGEVPKIERAGMDGSSRSVIVNTDIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL
DGSHRQAVVKGSLPHPFALTLFGDMLYWTDWNTHSILACSKYSGENLREIHSNIFSPMDI
HAFSQKRQPNATNPCGINNGGCSHLCLMSPAKPSYQCACPTGVKLLENGKTCKDGATELL
LLARRTDLRRISLDTPDFTDIVLPLEDIRHAIAIDFDPLEGYIYWTDDEVRAIRRSFIDG
SGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAI
VLDPMVGYMYWTDWGEIPKIERAALDGSDRIVLVNTSLGWPNGLALDYAESKIYWGDAKT
DKIEVMNADGTGRRVLVEDKLPHIFGFTLLGDYVYWTDWQRRSIERVHKRTAEREIIIDQ
LPDLMGLKATNVHQIIGTNPCAEDNGGCSHLCLYRPQGLRCACPIGLELINDMKTCIVPE
AFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFM
NGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPR
ALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLD
TNLIESSNMLGLDREIIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQG
HLDYVMDILVFHSSRQAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRTCSA
PTTFLLFSQKNAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNIIRK
AQEDGSQSLTVVTSPVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPMGVV
LKGDQDRPRAIVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALAIDS
QLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDRQQQMIEKID
MTGREGRTKVQARIAQLSDIHAVKELNIQEYRQHPCSQDNGGCSHICIVKGDGTTRCSCP
VHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCDGFTECEDHSDEKNCPVCSDT
QFQCESGQCIDSVLRCNGEANCQDNSDEKNCEVLCLTDQFRCASGQCIGKSKKCDHNLDC
SDSSDEQGCYTTEEPAPQPNNTIGSIIGVILTVFVVGAMYFICQRVLCPRVKGDGETMTN
DYVVQGQASVPLGYVPHPSSLSGSLPGMSRGKSVISSLSIMGGSSGPPYDRAHVTGASSS
SSSSTKGTYFPPILNPPPSPATERSHYTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTP
CSTDVCDSDYAPSRRVTAAAAKGYTSDLNYDSEPVPPPPTTPRSQYLSAEENYESCPPSP
YTERSYSHHLYPPPPSPCTDSS
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtattggacagactggggagaagtgccaaagatagaacgtgctgggatggatggttca
agccgctccgttatagttaacacggacatatattggccaaatggactgacgttggattat
gaggaacagaaactttattgggcagacgctaaactgaatttcatccacaaatcaaatctg
gatggaagtcataggcaagcagtggttaaaggctcccttccacatccttttgctttgacg
ctgtttggggacatgttgtactggactgactggaacacacattcaatcttggcctgcagc
aagtactctggggagaacctgcgtgaaatacattccaacatcttctctcccatggatatc
cacgctttcagccaaaagaggcagccaaatgctacaaacccatgtggaattaataatggt
ggctgctcccacttgtgtttgatgtctcctgccaagccctcttatcagtgtgcatgtccc
actggggtgaaacttcttgagaatggaaagacctgcaaagatggtgccactgaactgctg
cttctggcccgccggacagatttgaggcgaatttccttagacaccccggattttacagac
attgttctgccacttgaggacatccgccatgctattgccattgactttgatcctctggaa
ggatacatctattggaccgacgatgaagttagggccatccgccgctcgttcattgacggc
tcaggcagtcagtttgtcgtcacagcacagatcgcacatccggatggcattgctgtggac
tgggttgctcggaatctctactggactgacactggcacagaccgtattgaagttacgagg
cttaatgggaccatgagaaaaatcttgatatccgaagacctggaagaacccagagctatt
gttctggatccaatggttgggtacatgtactggactgactggggagaaatcccaaagatc
gagagggcagcattagatggctcagaccgaattgtgctggtgaatacttcgcttggctgg
ccaaatggactggcattggattatgcagaaagcaaaatatactggggagatgccaaaaca
gacaaaatagaggtcatgaacgctgatggaactggcagaagagttctggtggaggacaag
ctgcctcacatctttggattcacattgctgggagactatgtgtattggacagactggcag
aggcgcagtattgaacgcgttcataagcgcacagcagagagagagatcatcatagatcaa
ctgcctgatctaatgggcttgaaagctacaaatgtccaccagataattggtacaaaccct
tgtgcagaggataacggcggctgcagccatctttgtctgtaccgaccacaaggccttcgc
tgcgcttgccccataggcctggagctcatcaatgatatgaagacctgcatcgtcccagaa
gccttcctgctgttttctcggagagcagatatcagacgaatctctttagaaacaaacaac
aacaatgttgctatcccactcactggagtcaaggaagcttctgctctggattttgatgtg
acggacaatcggatttactggactgacatttcactgaagaccatcagcagagcgtttatg
aatggcagcgcactggaacacgtcgtggagtttggcttggattatccagaaggcatggct
gtagattggctggggaagaacttgtactgggctgataccggaacaaatcgtatagaagtg
tcaaaactggatggacaacatcgtcaagtgctggtgtggaaagatctcgacagtccccgg
gcattggcattggaccctgctgaagggtttatgtactggactgaatggggtggtaagcca
aagattgatagagctgctatggatggcagtgagcggacgacattggtaccaaatgtggga
cgtgctaatggcctgaccattgattacgctaaaaggcgactgtactggactgacctcgat
accaacctgatagaatcctccaacatgctaggccttgaccgtgagattatagctgatgac
ttgcctcatccattcggcttgactcagtatcaggattacatttactggacagactggagt
cggcgtagcattgaacgagccaacaagaccagtggccagaaccgaactatcatccaagga
catctggattatgttatggacatcctggtcttccattcctccagacaggcaggctggaat
gagtgcgcctctagcaatggtcactgctctcacctgtgcttagcagtccctgttggtggt
tttgtctgcggctgcccagctcactattccttgaattctgacaacaggacttgtagtgct
cctacaacctttctgttgttcagtcagaagaatgcaattaatcgcatggtgatagatgag
cagcagagtccagatatcatactccctatccatagcctcaggaacgttcgagccattgat
tatgatcccctggataagcagttgtactggattgattctcgacagaacatcatccggaag
gcacaggaagacggcagccagagcctcactgttgtgacaagtccagttccaaatcagaac
cttgatatgcagccttatgacctgagcattgacatctacagccggtatatctactggacc
tgtgaagctacaaatgtgatcaatgtgacacgcctggatgggagacccatgggagtagtg
ctcaaaggagatcaagatagacccagggccattgtggtgaatccagagaaaggatacatg
tatttcaccaacctacaggaaaggtctcctaaaattgagcgagcagcattggatggaact
gaacgagaggtcctctttttcagtggtttgagcaagcccatagccttagctattgacagc
cagctaggcaagttgttctgggctgattcagacctgcggagaattgaaagcagtgacctt
tcaggtgctaaccggattgttctggaagactctaatatcttgcagcctgtgggactaacc
gtgtttgaaaactggctgtattggattgacaggcagcagcagatgattgagaagattgat
atgactggtcgagaaggacgtacaaaggtccaagctcgtattgcacaactcagtgacatc
catgctgtgaaagagctcaacattcaggaatacagacaacatccttgctctcaagataat
ggtggctgctcgcacatctgcatcgtgaagggcgacggcaccacacgctgctcttgccca
gtccaccttgttctgctgcaggatgagctgtcctgtggagaaccaccaacgtgctcccct
cagcagttcacctgtttcacaggtgagattgactgcatccccgtggcctggcgctgtgat
ggtttcactgaatgcgaggaccacagtgatgaaaagaactgcccagtgtgctcagacacc
cagttccagtgtgagagtggacagtgcatagacagtgtcctccggtgcaatggagaagca
aattgccaggacaactcggatgagaagaactgtgaagtgctttgtttaactgatcagttc
cgctgtgccagtgggcagtgcatcgggaaaagcaagaaatgtgatcacaacctggactgc
agtgacagctcagatgagcaaggatgctacacaacggaggagcctgcgccacagcccaac
aacacaataggctccatcatcggtgtgatcctcacagtttttgtggttggagccatgtac
ttcatctgccagagagtgctgtgcccacgcgtgaagggagatggggaaactatgactaat
gattatgtggtgcagggacaagcctctgtacctcttggttatgtgcctcacccaagctcc
ttgtcagggtctcttcctgggatgtctcgaggtaaatctgtgatcagctccctcagcatt
atgggaggtagcagcgggccaccctatgacagggcccatgtcactggagcctcttctagt
agttcttcaagtaccaaaggcacttactttcctccaattttgaacccaccaccatcacca
gctaccgaacgttcacattacaccatggaattcggttattcttcaaacagcccatccact
catagatcctacagctacaggccttacagctacaggcattttgcacctcccacgacgccc
tgcagcacagatgtctgtgacagtgactatgcccccagccgaagggtgacggcagcggcg
gccaagggctacaccagtgacttgaactacgactcggagcccgttcccccgccgcccaca
acgccacgcagccagtacctgtcggcggaggagaactacgagagctgcccgccttccccc
tacacggagcgcagctattcccaccacctctaccccccgccgccgtccccctgcacggac
tcctcgtga
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