Colius striatus (speckled mousebird): 104559979
Help
Entry
104559979 CDS
T08355
Symbol
DHX15
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104559979 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csti03041
]
104559979 (DHX15)
03009 Ribosome biogenesis [BR:
csti03009
]
104559979 (DHX15)
Enzymes [BR:
csti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104559979 (DHX15)
Spliceosome [BR:
csti03041
]
Complex A
U2 snRNP components
U2 related factors
104559979 (DHX15)
Complex B
104559979 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104559979 (DHX15)
Ribosome biogenesis [BR:
csti03009
]
Eukaryotic type
90S particles
Helicases
104559979 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
WHD_HA2
DEAD
HA2_C
AAA_22
AAA_19
SRP54
Cas3-like_C_2
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
104559979
NCBI-ProteinID:
XP_010203471
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQ
IPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA
KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI
VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE
GDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ
NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR
AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD
PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS
ITAMLSDGVRC
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgattccacacagtattaaccctttcacaaatctaccacatacaccacgttattatgac
atcctgaaaaaaaggctacagcttcctgtctgggaatacaaagaaagatttacggatatt
ttgataaggcatcagtcatttgtgttggttggcgagactgggtctggtaaaacaacacag
atccctcaatggtgtgttgactacatgcgctcattacctggaccaaaaaggggagtagca
tgtacccagcctagaagagtagccgcgatgagtgtggcacagcgggttgctgatgagatg
gatgtcatgctgggccaggaggttggttactccattcgatttgaagactgcagtagtgca
aaaaccattttgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcct
ttgctggagcgttatggtgttataattcttgatgaggcccatgagagaacactggctact
gacattttgatgggagttttgaaggaagttgtaaggcaaagatctgatttgaaggttata
gttatgagtgctactttagatgctggcaaatttcagatctattttgataactgccctctt
ctaactatcccgggtcgcacacatcctgttgagatattctatactccagaaccagaaaga
gactaccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaa
ggagatctcttgctctttcttactggacaagaggagattgatgaagcctgcaagaggata
aaacgtgaaattgatgatttaggccctgaagttggtgacatcaaaatcattccattgtat
tccacccttcctcctcagcaacagcaaaggatttttgaacctcctccaccaaaaaaacaa
aatggagcaataggaaggaaggttgttgtgtccactaatattgctgagacatcattaaca
atagatggtgttgtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaatcct
cggatcagagtggagtctctcttggtgactgcaattagtaaagcttctgctcagcagcga
gctggtcgtgctggtcgtactagaccaggcaagtgcttcagactttatacagagaaggct
tacaaaactgaaatgcaggacaacacataccctgaaattttgaggtctaatttaggatct
gtagtattgcagctcaagaagcttggtatagatgatttggtgcacttcgattttatggat
cctccagctcctgaaactctgatgagagccttagagcttttgaactatttggctgctttg
aatgatgatggagacttgactgaattaggatccatgatggctgaatttccactggatcca
cagctggccaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatct
attactgccatgttgtcagatggggttaggtgttga
DBGET
integrated database retrieval system
