Colius striatus (speckled mousebird): 104560619
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Entry
104560619 CDS
T08355
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104560619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104560619
04121 Ubiquitin system [BR:
csti04121
]
104560619
03036 Chromosome and associated proteins [BR:
csti03036
]
104560619
03400 DNA repair and recombination proteins [BR:
csti03400
]
104560619
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104560619
Ubiquitin system [BR:
csti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104560619
Chromosome and associated proteins [BR:
csti03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104560619
DNA repair and recombination proteins [BR:
csti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104560619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_4
Ank_2
Ank
Ank_5
Ank_3
zf-RING_6
Ank_KRIT1
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
104560619
NCBI-ProteinID:
XP_010204325
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
SCVDDCVGTECPVCHMPAWVQDAQINRQLDNMVQLCSKMRHLLGPDTSDSVERMSTPTNS
DSGKKNKKEQMKMWFSPRSRKIRCILNQSQPEAKSHDLCQDTSSIYDFFPSPPHEKQSKP
IKKPTQSKKMKKKRLADINKMWSLEKAEEKDGVKEKTHKEKCVTICSEPVVLCTPEANSP
EEXXXXXXXXXXQQESVKEANSSKNTEIVEISPQVKSLERKGNSDFVCPAQVIKEKHCAA
EASLSVENETTPLKREREPSRLPVTSQSKRPRRSERSSTGKPGSQADCLEELPQGCSIST
ATEHKTPVQISSSVSKPANIVMKTRSSAVFQAINSPSLLKSSSTPSTFKTCDHVGIPHSP
SVLRSPGGNANARRNYKGETLLHVASIKGDLEAVEQLLKNGADPNVKDHAGWTPLHEACN
HGHKEVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVSIVELLLLHGASRDAVNIFGLRP
VDYAEGEKMKSVLMLPVKNESFSLKQPSEVLSPSQPRGGPLGILGSNLSSKQQKLLNKLA
TVLEAQRCTEFNSRVTHLVIPGVPMPSTVKCMMAVLTGCWVLKFE
NT seq
1757 nt
NT seq
+upstream
nt +downstream
nt
atcttgcgtggatgactgtgttggcacagagtgcccagtgtgccacatgccggcctgggt
gcaagatgcacagataaaccggcagctcgataacatggttcaactttgcagcaagatgcg
gcacctgctgggtccggacacctcagattcagtggagcgtatgtccacaccaactaactc
agactctggaaaaaagaataagaaggaacaaatgaaaatgtggttcagcccaagaagtag
gaagattcgatgcatcttgaatcagagtcaacctgaggctaaaagccatgacctttgcca
agacacatcttcaatttatgatttctttccttcccctcctcatgaaaagcaatccaagcc
aataaaaaagccaacacagagtaaaaagatgaagaagaaacgtctagcagacatcaacaa
aatgtggagcttagagaaggctgaggagaaagatggagtcaaggagaagactcacaagga
aaagtgtgtgaccatctgcagtgaaccagtagtgctgtgcactccagaagcaaacagccc
tgaagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagcaggagtctgtaaaggaagc
taactccagcaaaaatacagaaattgtggaaatatcaccacaggtaaaatccctggagag
aaaaggtaacagtgattttgtgtgtcctgcacaagtcatcaaggaaaaacactgtgctgc
agaggcatcactgtcagtagaaaatgaaactacacctttaaaacgtgaaagggagccatc
cagacttccagttacttctcagtctaagagacctagaagaagtgagaggagcagtactgg
gaagccaggcagtcaggcagattgcttagaggagttacctcagggttgctccatctccac
agcaactgaacacaagacaccagttcagatttcttcctctgtatcaaaacccgctaacat
agtcatgaagacaagaagctctgctgtctttcaagcaataaatagtccttcacttttgaa
atcttcttctaccccatctacttttaagacttgtgatcatgtaggaataccacacagtcc
ttctgtgttgagatcccctggtggtaacgcaaatgccagaagaaattacaaaggagagac
tttgctccacgttgcatccatcaagggtgacttagaagctgttgaacaactgctgaaaaa
tggggcagatcccaatgtcaaagatcatgctggctggacaccgctgcatgaggcatgtaa
tcatgggcacaaagaagtggtggagctgctgctacaacacaaggcgttagtgaatactac
agggtaccagaatgactcaccgcttcatgacgctgccaagaacgggcacgtgagcattgt
tgagctgctgcttttacatggtgcctcccgtgatgctgttaatatatttggtctgcggcc
tgtggactatgcagaaggtgaaaagatgaaatctgtgctaatgctgccagtcaagaatga
atcattttcacttaagcaaccctctgaggtgctgagccccagccagccaagaggtggacc
tcttggtatactggggagcaatcttagttcaaagcaacagaaattgctgaacaaactagc
aacagttctggaggctcagaggtgtactgaatttaacagcagagtaactcatcttgttat
ccctggtgttccgatgccaagtactgtcaaatgtatgatggctgtcctgactggatgttg
ggtcctcaaatttgaat
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