Colius striatus (speckled mousebird): 104560789
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Entry
104560789 CDS
T08355
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csti04131
]
104560789 (VPS53)
Membrane trafficking [BR:
csti04131
]
Protein recycling
Others
EARP complex
104560789 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
104560789 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Laminin_II
Sec8_N
COG5_N
GrpE
Syndetin_C
hAT-like_RNase-H
NBD94
COG3_N
FUSC
MCPsignal
Med11
XhlA
Seryl_tRNA_N
Dor1
Snf7
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
104560789
NCBI-ProteinID:
XP_010204537
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
VFPSQDPLDRADFNAVEYINALFPTEQSLANIDEVVNKIRLKIRRLDDNIRTVVRGQTNV
GQDGRQALEEAQKAIQQLFGKIKDIKDKAEKSEQMVKEITRDIKQLDHAKRHLTTSITTL
NHLHMLAGGVDSLEAMTRRRQYGEVANLLQGVVNVLEHFNKYMGIPQIRQLSERVKAAQN
ELGQQILADFEEAFPSQGTKRPGGPSNVLRDACLVANVLDPRIKQEIIKKFIKQHLSEYL
VLFQENQDVAWLDKIDRRYAWIKRQLVDYEEKYGRMFPQEWGMTERIAVEFCHITRTELA
KIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKRFSGCTLTDGTVKKPEVPLPSTNPFLEDE
TGTETDEIVIEKSDMDKPKKPKVPDNPFHGIVSKCFEPHLYVYIESQDKNLSELIDRFVT
DFKAQGPPKPNVDEGGAVLPSCADLFVYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYA
WKILSGNLPKTTSSSGGLTITSLLKEKEGSEVAKFTLEELCLICSILSTAEYCLATTQQL
EEKLKEKVDGSLVERINLTGEMDTFSIVISNSIQLLVQDLDAACDPALTAMSKMQWQNVE
HVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFINHLFKCKPIS
MVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEP
LVVFVDNYIKLLADCSTDTFQKILDMKGLKRSEQSSMLELLRQRLPAPPSGTESGGSLAL
STPTPEQESSRIRKLEKLIKKRL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtatttcccagccaagatccgttggacagggcggatttcaatgctgtggagtacattaat
gctctctttcccactgagcaatctttggcaaacatcgatgaagttgtgaacaagatcaga
ttgaaaataaggaggttggatgacaacattcggactgtagtgagaggccagaccaacgtg
ggccaggatggcaggcaggccctggaagaagcccagaaagccattcagcagctctttggt
aaaattaaggatattaaagacaaggctgaaaaatcagaacaaatggttaaagaaatcaca
cgagatatcaagcagctagatcatgccaagcgtcatctgaccacctccatcaccaccctc
aatcacctgcacatgctggcaggaggagtggattccctggaggctatgaccaggagaaga
caatatggggaagttgccaaccttctccagggtgttgtgaatgtcttggagcacttcaac
aagtacatgggaattcctcagattcgacagctttctgaaagggtgaaggcagcacagaat
gagttgggacagcagatcctggctgatttcgaggaagcctttccttctcaaggtacaaag
agacctggtggacccagcaatgtcctacgtgacgcatgtctagtcgccaatgtcctggat
cccagaatcaaacaagaaatcatcaagaaattcattaaacaacatctctcagagtatctg
gtccttttccaggaaaaccaagatgtggcctggctggataagatcgacaggcgttacgct
tggatcaagcgtcagctggtggactacgaggagaagtacgggcgcatgttccctcaggag
tggggcatgacggagcgcatcgccgtggagttctgccacatcaccaggacagagctcgct
aagataatgcgcacaagggcaaaggagattgaggtgaaactgcttttgtttgcaattcag
aggacgaccaactttgaaggacttctggctaaacgcttctcaggttgcactctaacagat
gggacagtgaaaaagccagaagtgccacttccctccaccaacccatttctggaggatgaa
acggggacagagacagatgagattgtgatcgagaaaagtgatatggacaaaccaaagaag
ccaaaggtccctgacaatcctttccatggcattgtttccaagtgctttgagcctcatctt
tatgtgtatattgagtcccaagacaaaaatctcagcgaactgattgacaggtttgtgact
gacttcaaggctcagggtcctcccaagcccaatgtggatgaaggaggagctgtcctgccc
agctgtgcagacctctttgtgtactacaagaagtgcatggtacagtgctcccagctcagc
actggtgagccaatgatagctctgaccaccatcttccagaagtaccttcgggaatacgcc
tggaaaattctgtctggaaacttgcccaagacaactagcagcagcggtggactcaccatc
actagtttgctgaaagaaaaggaaggctctgaagtggcaaagtttactttagaggaactc
tgcctcatttgcagcatccttagtactgcagagtactgcttggcaaccacccagcagttg
gaagagaaactcaaagaaaaagtggatggaagtctagtggagagaatcaacctgacggga
gagatggacactttcagcattgtgatctcaaacagcatccagctgttagtgcaggacctg
gatgcagcctgtgaccctgccctgactgccatgagcaagatgcagtggcagaacgtggaa
cacgttggtgaccagagtccttatgtcacctccgtgattctccacatcaagcagaacgtc
cccatcatccgtgacaacctggcttccacgaggaagtatttcactcagttctgtatcaaa
tttgcaaactccttcatccccaagttcattaaccatctcttcaagtgcaaacctattagc
atggtgggagcagaacagctgctgctggacacacactctctgaagatggttctcctggat
ctgccctccattgggtcccaagtggtgaggaaggctcctgccagctacacaaagatagtg
gtgaaaggcatgactcgggctgaaatgatcctgaaggtggttatggctccgcacgagccc
ctggttgtgtttgtggacaattacatcaagctcctggctgactgcagcaccgacactttc
cagaagatactagacatgaagggcctgaagaggagtgagcaaagcagcatgttggagctg
ttgcggcagcggctcccggcccccccgtccggcacagagagcggcggctccctggcgctc
agcaccccgacacccgagcaggagtcctctcggatacggaaactggagaaactcatcaaa
aaaagactctaa
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