Colius striatus (speckled mousebird): 104561439
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Entry
104561439 CDS
T08355
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03013
Nucleocytoplasmic transport
csti03015
mRNA surveillance pathway
csti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104561439 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
104561439 (CASC3)
03015 mRNA surveillance pathway
104561439 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104561439 (CASC3)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104561439 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104561439
NCBI-ProteinID:
XP_010205416
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
ESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELKQDSNDSCESAAKAEKGDEKPD
SKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQT
QEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRR
MRKPRFGSPPQRDPNWSNERPSKPPRHQGADSTLAPPRTFSNRSSAGTGRMPPPRIYPRM
GGYKETRPGYRASEASAQHLSRNGEPVKQESGYRAKRGEQSPPRDKSPEVDAACVHSSPG
KEDMGLETQPTAADAAQPPPDRPVEKKSYSRARRTRMKAGDAGKLPDETASSEGLNPAPP
KPLQAETSPPPAKNSSWESPVEPSLDGLEQEMAQVNLTEQSWAAGQSQFIQPRELRGIPN
HMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEGHYYDPIQFQ
GPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHPHQTAAPMANPGLYPPPVSMPPGQPPPQ
QLIAPTYFSPPAVMNFGNPSYPYAPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQV
QPKPSPPRRTSQPVTIKPPPPE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gaaagcgaggatggcattgaaggagatgctgtgctctcggattacgaaagcgcagaagac
tcggaggcagaagaagaggattacagcgaggaggaaagtgccaaagtggaactgaagcag
gacagtaatgattcctgtgagtcagcagcaaaagcagagaaaggggatgagaaacctgac
tccaaaggtgctgtgaccggggagaggcaaagcggggacgggcaggagagcactgaacct
gtcgagaataaagttgggaagaaagttcccaagcacctggatgacgacgaagaccggaag
aacccggcctacatcccacgcaaagggctgttcttcgagcacgacctccgagggcagacg
caggaggaggaggtcaggcccaagggccgccagcggaagctgtggaaggacgagggccgc
tgggagcatgacaagttccgggaggacgagcaggcccccaagaccaggcaggagctgatt
gccctttatggctatgacatcaggtcagctcacaatcccgatgacatcaagcccaggagg
atgcgcaagccaaggtttgggagtcctcctcagcgagacccaaactggtccaacgagaga
ccaagcaaacccccacggcaccagggtgctgacagcactctggctcccccacgaaccttc
agcaacaggagctctgcaggcacgggcaggatgccccccccgaggatatacccacggatg
gggggctacaaagagacccgcccaggctaccgagcatcagaagcaagtgcccagcatctc
tctcgaaacggtgagccagtgaaacaggagagtggctaccgagccaagcgaggcgagcag
agcccaccgagggacaagtcacccgaggtggatgcggcatgtgtccacagcagccccggg
aaggaagacatgggtttagaaacccaacccacagctgctgatgctgcgcagccaccgcca
gacaggcccgttgaaaagaagtcttattcccgggcaagaaggaccagaatgaaagctggg
gatgctgggaagctgccagatgaaacagcttcttcggaagggctgaatcctgcacctcca
aaacctttgcaagccgagacatcccccccaccagccaagaactccagctgggagtcgcca
gtagaacccagcttggatggactggagcaggagatggcccaagtgaacctgacggagcag
agctgggcagcggggcagtcgcagttcatacagccccgggagctgaggggtattcctaac
catatgcacgtgggaactgggccaccacctcagtttaacaggatggaggaaatggcagtg
caggggggccgtgtgaaacgctactcgtcgcagcggcagagacctccggtgccggagcct
gctccccccatgcacatcagcatcatggaagggcactactatgacccaatacaattccag
ggaccaatctacacccacggcgagaacccagccccgctgccaccccaaggaatgatcgtg
cagccagaaatgcatctccctcatccaggtttacatccccaccagacagcagcccctatg
gcaaaccctggcctctaccctccaccagtctccatgccccctggccagcccccaccacag
cagctgattgcaccaacttacttctcccctcctgcagtcatgaattttgggaaccctagc
tacccctacgccccaggagcactcccccctccacctcctcctcatctctattccaacacg
caggcccagtcccaggtgtacggaggggtcacgtactacaacactgtccagcagcaagtg
cagcccaagccttcaccacctcgaaggacatcccagcctgtgaccatcaaaccaccccct
cctgag
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