Colius striatus (speckled mousebird): 104561611
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Entry
104561611 CDS
T08355
Symbol
RC3H2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csti03000
]
104561611 (RC3H2)
04121 Ubiquitin system [BR:
csti04121
]
104561611 (RC3H2)
Transcription factors [BR:
csti03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104561611 (RC3H2)
Ubiquitin system [BR:
csti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104561611 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
104561611
NCBI-ProteinID:
XP_010205641
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
ASPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKGGKAGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLPYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVPSTLPMATPSPTPPSPLFSVDFGTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWTAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKKGTDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISSQEDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT
SCFSQPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacaccgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtgaagttgagtaatgtgggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgaccgatgcaaagaaagcttgtgacactggtgaattgt
cagctggtggaggaggagggtcgggttagagccatgagagcagctcgatcactgggagag
agaaccgtcacagaattgatcttgcagcaccaaaatcctcagcagctttctgccaatctc
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
cacgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaactgaaagaagaatttcggagttacgaggctttgcggagagaacac
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagagcaatgg
tcttcccttctttatggtgacttggcacataaatcccacatgcaatccattattgacaag
ctccagtctccagagtcttttgcaaagagtgtacaagaactgacaattgtcttgcagcgc
acaggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccgacatgggagcagctggaaaatgcaatggttgct
gtgaagaccgtggtgcatgggctggtggatttcattcagaattacagtagaaaaggccat
gaggctccccagccacaaccaaatagcaaatacaaaacaagcatgtgcagagaccttcgg
cagcaaggggggtgtccaagaggaacaaactgtacatttgctcattctcaggaggagctt
gaaaaataccgcttgaggaacaaaaaaatcagcgcaacagtgagaacattcccacttcta
aataaagttggcgtaaatagcaccgtctcaaccacaacaggaaatgtcatttctgtcata
gcaagtcctgaagcaacaggaaagatggtgccaagtactaacggaatagcgaatctagag
agcggtgttccccagctgatccctcgctgtgcagacacctccttgagagctttggagaac
accaagaagggagggaaggctggagccaatggccagaatgtttctggttcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaacattggaacagaagtgaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacctgtctaccctccacattctgataatgttcagtatttccaa
gaccccaggactcagctgccatatgaagttccccagtacccacagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcattcgtctgtctatcaaacatcgttacgtgagagatacaactctttggatggg
tattactctgtggcatgtcaacctccaaacgagcagaggactgtgcctttaccaagggag
ccttgtggacacttgaagactggttatgatgagcagttgcgacggaagccggagcaatgg
gcgcagtaccacacgcagaaaactcctctggtaccatcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcggcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccatgg
tcttgtggcactattggctcttgtataaatgctatcgactcggagcccaaggatgtgatt
gccaattcaaatgccgtgttaatggatctggacagtggggatgttaaaaggagagtgcac
ctatttgaaactcagagaagggcaaaggaggaagatcctataatcccatttagtgatgga
cccatcatctccaagtggggtgcgatctccaggtcatcccgcacgggttatcacacgaca
gatcctattcaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccttatgtcaacgctgttgactcgagatggactgcctatggctcggattccgct
tcatcagctcgctatgccgaacgggacagattcatagttacagatttgtctggtcacagg
aagcattccagcactggagacctattgagtattgaattacagcaggccaaaagtaactcg
ctgttacttcagagagaggcgaatgcactagccatgcaacagaaatggaattccctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
gtaaagaaagggactgattatactgaagactgtgcagacacaaagccagatcgagacatt
gaactggagctgtcagcccttgatacagacgaacctgatgggcaaggtgaacaaatagaa
gagattctggacatacagctaggtattagttctcaagaggatcagctgctcaatggaaca
acagtagagaatgggcacccactaaagcagcatcagaaagaatctatggaacagaagaga
caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
tcttgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagc
acatcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa
aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
