Colius striatus (speckled mousebird): 104561992
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Entry
104561992 CDS
T08355
Symbol
PRDM1
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csti03000
]
104561992 (PRDM1)
Transcription factors [BR:
csti03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104561992 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2HE
zf-C2H2_8
zf-C2H2_15
Zf-C2H2_ZNF451
CapR
Motif
Other DBs
NCBI-GeneID:
104561992
NCBI-ProteinID:
XP_010206187
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
IYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELL
VWYCRDFAERLHYPSSRELTMMNLTQTHVNPKQHSADKDELYQKSIPKKEHSVKEILKME
SHPPKEKDFFQTNISPLTPEKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYG
MDRPSYLIHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHREPYPYS
NGSYGSEGLGSYPGYAPPGHLPPAFLPSYNPHYSKFLLPPFNMSCSNLSALNNINGINNF
NLFPRMYPLYGSLLSGGSHHMLNPTALPSSLPSEGGRRLLQPXDFLIPAPNSAFSITGAA
ASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGSEEAVNLIKSKRNVTGYKTL
PYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHY
LVHTGEKPHECQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atctattcaagtggtgagcttcaccacttcattgatggatttaacgaggacaagagcaac
tggatgcgttatgtaaaccccggctactctgttcaggaacagaacttggctgcttgtcag
aatggaatgaacatctacttctacaccatcaagcccatccctgccaaccaagagctgctt
gtgtggtattgccgggactttgcagagaggctgcactatccctcctccagagagctgaca
atgatgaacctcacacaaacccacgttaatccaaagcagcacagtgccgataaagatgag
ctctatcagaagagcatcccaaagaaggagcacagtgtgaaagaaatcctgaaaatggag
tcccatcctccgaaagaaaaagacttcttccagaccaacatttcaccacttactccagaa
aaagacttggatgacttgcgtaagaactatagccccgagaggtgtttcttccctcgagtt
gtctacccgatccgacctcacattccagaagactatctgaaagcttcgctagcatacggg
atggacagacccagctaccttattcactcgcccatccaggcgtctactacgccgagtcct
tccgggaggagcagcccagaccaaagtttaaaaagttcaagccctcacagcagcccaggg
gtcacggtttcacctctggcacccacttcccaggagcacagggagccgtacccttactcg
aacggatcgtatggctcggaagggttggggtcttaccctggatatgcaccccctggccac
ctcccgcctgccttcctaccgtcctataacccccactactccaaattcctgttacctcca
ttcaacatgagctgtagtaacctgagcgctttgaacaacatcaacggcatcaacaatttc
aatctcttcccaaggatgtatcctctttatggcagcctgctcagcgggggcagccaccac
atgctgaaccccaccgcgctccccagctcgttgcccagcgaagggggccgtcggttgctg
cagccttgagacttcctcataccagcacccaacagtgccttctccatcacgggcgctgct
gccagcatgaaggacaagccctgcagccccaccagcgggtcacccaccgctggcacagca
gccagctcggaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggc
agcgaggaagccgtgaatctcatcaaaagcaagaggaatgtgaccggctacaagaccctc
ccgtacccactgaagaagcagaacgggaagatcaagtacgaatgcaacgtttgctccaag
acctttggccagctctccaatctgaaggtgcacctccgagtacacagcggggagaggccc
ttcaaatgccagacgtgcaacaagggcttcacgcagctggctcacctccagaagcactac
ctggtgcacacgggagagaagccccacgagtgtcag
DBGET
integrated database retrieval system
