KEGG   Colius striatus (speckled mousebird): 104562050
Entry
104562050         CDS       T08355                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
csti  Colius striatus (speckled mousebird)
Pathway
csti03030  DNA replication
csti03410  Base excision repair
csti03420  Nucleotide excision repair
csti03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104562050 (RFC2)
   03410 Base excision repair
    104562050 (RFC2)
   03420 Nucleotide excision repair
    104562050 (RFC2)
   03430 Mismatch repair
    104562050 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csti03032]
    104562050 (RFC2)
   03036 Chromosome and associated proteins [BR:csti03036]
    104562050 (RFC2)
   03400 DNA repair and recombination proteins [BR:csti03400]
    104562050 (RFC2)
DNA replication proteins [BR:csti03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104562050 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104562050 (RFC2)
Chromosome and associated proteins [BR:csti03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104562050 (RFC2)
DNA repair and recombination proteins [BR:csti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104562050 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104562050 (RFC2)
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_22 nSTAND_NTPase5 AAA_lid_RFC1 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 Mg_chelatase AAA_11 AAA_assoc_2 AAA_19 DNAX_ATPase_lid nSTAND3 DEAD AAA_24 MipZ AAA_18 AAA_5 Rep_fac_C AAA_28 ABC_tran AAA_25 AAA_23 RuvB_N AAA_30 SLFN-g3_helicase RNA_helicase MeaB NTPase_1 Rad17 FtsK_SpoIIIE AAA_29
Other DBs
NCBI-GeneID: 104562050
NCBI-ProteinID: XP_010206254
LinkDB
Position
Unknown
AA seq 240 aa
MKLCEVVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDPQILARLLKIVEKEDVPYTDDGLEAIIFT
AQGDMRQALNNLQSTYAGFGFINSENVFKVCDEPHPLLVKEMIQHCISANIDEAYKVGFQ
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaagctgtgcgaagtggttggcaatgaagatacagtcagcaggctggaggtctttgca
agagaggggaatgtgccaaacattatcattgctggccccccaggaacaggtaaaaccacc
agtatcctctgcttggctcgtgctctgcttggtcctgcattaaaggatgctgttctggag
ctgaatgcctcaaatgacagaggcattgatgttgtgagaaacaagatcaaaatgtttgcc
cagcagaaggtcacgctgcccaaaggccggcataagataatcatccttgatgaagcagac
agcatgactgatggagctcagcaggcactgaggagaaccatggaaatctattccaagacc
acacgcttcgccctggcctgcaacgcctctgacaaaatcatagagcccatccagtcccgg
tgtgcagtgctgcgttacaccaagctgacagatccacagatccttgcaagactactgaaa
atcgttgagaaagaggatgttccatacacagatgatggactagaagccattatcttcaca
gcccaaggagatatgagacaggcattaaacaacttgcagtccacatatgctggctttggc
tttataaacagtgaaaatgtctttaaggtgtgtgatgagcctcatcctctgcttgtgaaa
gaaatgatacagcactgcataagtgcaaacattgatgaagcatacaaggttggtttccag

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