Colius striatus (speckled mousebird): 104562156
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Entry
104562156 CDS
T08355
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
csti
Colius striatus (speckled mousebird)
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csti03021
]
104562156 (SCAF4)
03041 Spliceosome [BR:
csti03041
]
104562156 (SCAF4)
Transcription machinery [BR:
csti03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104562156 (SCAF4)
Spliceosome [BR:
csti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104562156 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104562156
NCBI-ProteinID:
XP_010206410
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
CSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSR
GNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNET
LSPEWKGIPKKSENEVAQNGGAEATHTEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHP
SGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPI
TPPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVP
PPVAPTNVPAPVTQAIPHLGTQGVAPPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGMPP
PPLQRFPLMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGAP
GGPEDNREGRQFRNDRQNFTPNRDQERFGRRSFGNRVENDXXXXXXXXXXRCRLSSADRR
EWGRRSPERDRHRDSEDRSRRSSSHRDRERDLRDRESRRDKEESRGKEKQETADRADGDK
NHEPHGGKKEEADIVSELAAGEPEATGVKAVGELTAEATSSVEHAEKELGSVAEAPR
NT seq
1796 nt
NT seq
+upstream
nt +downstream
nt
tttgtagtactacgctttgggtaggacaacttgacaaaaggacaactcaacaggatgttg
gtagtcttttggaggagtttggcccaattgagtcaataaatatgataccgcctagaggat
gtgcctatattgtaatggttcacagacaggatgcttaccgtgccctgcaaaaactgagcc
gaggaaatttcaaagtcaatcagaaatctataaagattgcgtgggctttgaacaaaggaa
taaagccagattacaagcagtattgggatgtagaattaggtgttacttacataccatggg
acaaagtgaaacctgaagatcttgaaagtttctgtgaaggaggaatgttggacaatgaaa
ctctaagtccagagtggaagggaattcccaagaaatctgaaaatgaagtagctcaaaatg
gaggtgcagaagctacacatactgaaccagtgtcacctatacctaaagctttacctgttc
cgattcctgttcccatgcctgcaccaataacagtacctcctccacaggttccaccacatc
catcaggtcctcctgtggttggtgcactccaaccacctgctttcacggcacctttaggaa
tcccacctcctggatttgctcctggagtgccaccaccacccccacctccatttttacgac
ctggtttcaacccaatgcatttacccccaggctttcttcctcctggaccacctccaccta
taactcctccagtttctgttcctcacactccggcagtaaatatcccaaattctacagcaa
ctggtgtgaatgaagacactacaaaagactcatctgtaggaaatcccatcccaacagtgg
tttctggatcaagagggaatgctgaaactaccgatagttctaaaatatatgggactgttc
caccgcccgtagcacctactaacgtgcctgctcctgtcacccaagctattccacatcttg
gcactcagggagtggcaccaccaccaccagcccccgtggttgggctacagactccatcca
ccggcctcctgggtgcccgacctggtctgataccactccagcgaccgccagggatgccgc
cccctcctctgcagcgcttccccttgatgccgccgcgacacatgcctccccacatgatgc
acagagggcccccgccggggccagggggcttcgggatgcctcccccccacggaatgaaaa
cccccttcccaccaccgggtcactttgtgaggccgggggggatgccgggcagcggggcgc
cgggcggacccgaggataacagagaggggaggcagttcaggaacgacaggcagaacttca
cacctaacagagaccaggagaggtttggaaggaggtcatttgggaatcgggtagaaaacg
accnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgctgtcggctcagtagtgccgacaggc
gagagtggggccggaggagccctgagcgtgacagacacagagactcggaggacaggagca
ggcggtccagcagccaccgagacagggagagagatttgagagacagggagtctcgtagag
acaaggaagaaagccgagggaaggagaagcaggagacggcagacagggcggacggcgaca
aaaaccacgagcctcatggcggcaaaaaggaagaggcagacattgtttcagaactcgctg
cgggagagcccgaggcaacgggcgtcaaagccgtgggagagctaacggccgaggctacct
catctgtggaacacgccgagaaggagctgggctccgtggccgaggctccccgctag
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