Colius striatus (speckled mousebird): 104562411
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Entry
104562411 CDS
T08355
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104562411 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csti04990
]
104562411 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
csti04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
104562411 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
zf-C3HC4_3
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
104562411
NCBI-ProteinID:
XP_010206799
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
VASATKPDLIHVPKGEPTEVVKPVPIASAIAPKVTATASVAYNKTPRPFGAVTSKVTSIP
SPSXXXXXXXXXXXAAAASPSPAAAGQAPFAAPGVHVNAKPHAEQWPPVPSAAKPAVNVP
RQPSAAAHNAAPSASAGNGAQDVAEGPRRGVNENQGESKQQNGPPRKHIVDTYTEFYPTH
THSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPEHEGAKKTNDSLEATQ
PAAAFSATSARSMPACQENTATRPAPVSTTSAAGLKPTGPPGAAKYSGWQPANQAAPASG
WTSNSIQGPGTTATSEKSATAPQLNEQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVA
LGKSWHPEEFNCAHCKTSMAYIGFVEEKGALYCEGCYEKFFAPECSKCQRKILGEVINAL
KQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCRGCEFPIEAGDRFLEA
LGHTWHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
1570 nt
NT seq
+upstream
nt +downstream
nt
agtggcttctgcaacaaaacctgatcttattcatgtaccaaagggagaacctacagaagt
agttaagcctgtgcccattgcctctgctattgcacccaaagtcactgccacggcgagcgt
ggcttacaataagacaccgaggccgtttggagccgtaacctccaaagtcacctccatccc
atccccgtcatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggcggcggccgcgtcccc
atccccggcagctgccggccaggccccgtttgctgctcccggagtgcatgttaacgccaa
gcctcacgctgagcagtggccgcccgtgccgagcgctgctaaacctgcagttaatgtccc
acggcagccctccgccgccgcgcacaatgccgctccaagcgcctctgctggcaacggcgc
ccaggacgtagcagaggggccacgacgaggagtcaatgaaaaccagggggagagtaaaca
gcaaaatggacccccacggaagcacatcgtggatacctacacagagttctaccccacgca
tacccacagcgatgccagcaagaagcgtctgattgaggataccgaggactggcatcctcg
aacgggcaccacccagtctcgctccttccgtattcttgcccaaatcaccggcactgatca
catgaaagaaccagaacatgaaggtgcaaagaagactaatgactctctggaggctaccca
acctgctgctgctttttcggccacctcagcaaggagcatgcctgcctgccaagaaaacac
agccacaagacctgctcccgtcagcaccacatctgctgcaggcctcaagcccacgggacc
cccaggtgctgccaaatactctggctggcagcctgcaaaccaagcagctcctgccagtgg
atggacatcaaacagtattcaaggacctgggacaactgccactagtgaaaaatctgcaac
agcacctcagctaaatgaacaggacacgttggttcagagggcagagcatatcccagcagg
aaagcgtacacccatgtgcgcacactgtaatcaagtcattagaggacccttcttggtggc
tttggggaagtcgtggcatccagaggagtttaattgtgctcactgcaaaacctccatggc
ttacataggatttgtggaagagaaaggggctctgtattgcgagggctgctatgagaagtt
ctttgcccctgagtgttcaaagtgtcagagaaagatccttggggaagtaataaatgcttt
gaaacaaacttggcacgtttcctgcttcgtgtgtgtggcctgtcataaccccatccgtaa
taatgtcttccacttagaagatggcgatccctactgtgagacggattactatgctctctt
tggtactatgtgccggggctgtgaattccccattgaagccggagacagatttcttgaagc
tctgggccacacttggcatgacacttgctttgtatgctcagtatgcagtgacagtctgga
gggtcagactttcttctccaagaaggacaagccgctgtgcaagaaacatgctcactctat
caacatctga
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