Colius striatus (speckled mousebird): 104562678
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Entry
104562678 CDS
T08355
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104562678 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csti04121
]
104562678 (TRIP12)
Enzymes [BR:
csti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104562678 (TRIP12)
Ubiquitin system [BR:
csti04121
]
Ubiquitin ligases (E3)
HECT type E3
104562678 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104562678
NCBI-ProteinID:
XP_010207157
LinkDB
All DBs
Position
Unknown
AA seq
2038 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVSTPQEDPERVNTSEKQKTGQVPKKDSSRGVKRSVSPDY
RRTNSPSSAKKSKALQHTETSLDTNKPHTKSKRRHLDQEQVKSAQLPSTSKVHTRKGGAA
GSSRSLKRKRTESLSSIKSGSAVDSTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSSA
STSSSSSAVASAASTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEQNKTGGSSKF
DWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSL
RRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRM
FSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICEL
MPCLPKEGIFAVDTMLKKGNAQNTDGATWQWRDDRGLWHPYNRIDSRIIEQINEDTGTAR
AIQRKPNPLANTNTSGHSESKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAV
RHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLP
DIFSVYFRREGVMHQVKNLAESEALLTSPPKVCTNGSGTLGTTTTISTGTATAASNAAAD
LGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTT
QSPKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIK
EQAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSESDVS
SFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLENAP
LLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQLKCQLQRHP
DCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQF
LNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWTKTH
TIWYKPVREDEDGNKDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEVYL
ISAPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINSKLTAKANR
QLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQ
SDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEF
YALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIAKVK
MKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYHLED
IVRQKKRLEQDKTQTKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDTPVT
IHNLEEYLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKTDTW
DAKTLMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSLNP
PLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgtttcaacaccacaagaagatccagagagagtcaatacttcagaaaagcaaaaaacg
gggcaagtgcctaagaaagacagttctcgaggagttaaacgcagtgttagtccagattac
aggaggaccaattctcctagctctgctaaaaaatccaaagcacttcaacacactgaaact
tccttggacactaacaagccacatacaaaatctaagagaagacacttagaccaagaacaa
gtgaagtctgcacaattgccatcaacaagcaaggttcacaccagaaagggtggagctgct
ggtagctcccgaagtctgaaaaggaaaaggacagagagtctgtcttctataaagagtggt
tcggcagttgactcaactggcgctgaagagaagtcagcaaaactctccaagctggcttca
aaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcctcttcagct
tccacatcctcctcctcttcggctgttgcctctgctgcttctactgttcctcagggtgcc
agagtgaaacaaggaaaggaccagaataaggctagacgttcccgttctgcatccagcccc
agtccaagaaggagtagcagggacaaagaacagaataaaacaggtggctcttcaaagttt
gactgggctgcccgattcagcccaaaagtcagcctccctaaaacaaaactgtctctacca
ggctcttccaagtcagagacatcaaaacctggaccttcaggactacaggctaagctagca
agtctaagaaaatctactaagaagcgcagtgaatcaccacctgctgagctccccagtttg
cggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggctct
ggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcctgac
aacaaccaggatggtgttaactcttcagctgcacgtacagatgaggctccccagggagct
gcagcttctagttctgttgctggagctgtaggcatgacaacatctggagagagtgagtca
gatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcctcac
ctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagtgga
gctagttccaaagcccaacagcttttacaaggtctccaagccactgatgaaagtcagcaa
ctacaggcggtgattgagatgtgccagctgttggtcatgggaaatgaagaaacattagga
ggatttccagtcaagagtgttgtaccagctttgataacactgctgcagatggagcacaac
tttgacattatgaaccatgcgtgtcgagccttaacgtatatgatggaagcacttcccagg
tcatctgctgtagtggtagatgcaatcccggttttcttggaaaagctgcaagttattcag
tgcattgatgtggcagagcaggcgcttacagccctagagatgttgtcacgcaggcatagt
aaagctattctgcaggcaggtggattggcagactgtttgctgtatctggaattcttcagt
ataaatgcacagaggaatgcactagctattgctgccaactgctgccagagtataacacct
gatgagttccactttgtagcagactctttgccactgcttacacaaaggctaacccatcag
gacaaaaagtctgttgaaagcacttgtctctgttttgcacgactagtagacaactttcag
catgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatattcagcaa
ctcttggtggtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgcatg
ttttccttaatgtgctccaattgccctacacttgcagtccaacttatgaagcaaaatatt
gcagaaacacttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaaatt
gaccttgttccacgaagtcctcaagaactttatgagcttacttctcttatctgtgaattg
atgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaaggaaac
gcgcaaaatacagatggtgcaacatggcaatggcgagatgacaggggtctctggcatccc
tataacaggatcgatagtcgaataatagagcaaattaacgaggatactggaacagcacgt
gccattcagcggaaaccaaaccctttagccaatacaaacactagtggacattcagagtca
aagaaggacgatgctcgagcacaactaatgaaagaggacccagaactggcaaaatccttt
atcaaaactttgtttggtgttctttatgaagtgtatagttcttcagctggacctgctgtt
agacacaagtgccttagagcaattcttaggataatttattttgctgatgctgaacttctg
aaggatgtgctgaaaaaccatgctgtttcaagtcacattgcctccatgctgtcgagtcaa
gaccttaagatagtagttggagccctgcagatggcggagattttaatgcagaagttacct
gacatttttagtgtttacttcagaagagaaggggtgatgcaccaagtgaaaaacttagcg
gaatctgaggctttgctaacaagcccgccaaaagtatgcactaacggatcgggaacgctg
ggtaccactacaacaataagtactggaacagccactgctgctagtaatgcagctgcagat
ttgggatcccctagcttgcaacacagccgggaggattctttggacctgagcccacaggga
cgactcagtgatgttctaaagagaaaaagactgccaaaacgagggccaaggagaccaaaa
tactctcctccaagagatgatgacaaagtagacaatcaagctaaaagccctacaactacg
caatctcctaaatcatctttcttggcaagtttaaatcctaagacatggggaagattaagc
acacagtcaaacagtaataatattgaaccagcacgaacagcaggagtaagtggtcttgca
agggctgcttccaaggatacaatttccaataacagagaaaaaattaagggctggattaag
gagcaagcccataaatttgtagaacgttactttagttctgaaaacatggatggaagtaat
cctgcactaaatgtattacagagactttgcactgcaactgaacaactcaacctccaggtg
gatggtggaacagagtgccttgtagaaatccgtagcattgtctcggagtctgacgtctcc
tcatttgaaatccagcatagtgggtttgttaaacaactgctgctttatttgacatctaaa
agtgagaaagatgctgtaagcagagatatcagattgaaaagatttcttcatgtatttttt
tcttctccacttcctggagaagaaccccttggaagattagagccattagaaaatgcacct
ttattggcattagtccataaaatgaacaattgcctcagtcagatggaacagtttcctgtt
aaagtgcatgacttccctagtgggaatggaacagggagcagtttttctcttaacagagga
tcccaagctttaaagttcttcaatacacatcaattaaaatgccaactgcaaagacatccg
gactgtgctaatgtcaaacagtggaaaggtggacctgtgaagattgatcctctggctttg
gtgcaagccattgaaagatatcttgtagttagaggttatggaagagttagagaagatgat
gaggacagtgatgatgatggatcagatgaagaaatagatgaatctttggctgctcaattc
ttgaattcagggaatgtgagacacagacttcagttctacattggagatcacttgctgcca
tacaatatgactgtgtatcaagcagttaggcagtacagtttgcaagctgaggaggagagg
gagtctacagatgatgaaagtaaccctttaggaagagctgggatttggacaaaaacacat
accatttggtacaaacctgtgcgagaggatgaagatggtaacaaggactgtgttggtggt
aaaagaggaagagcacaaactgctcctacaaaaacttcccctagaaattctaaaaagcat
gatgaattgtggcatgatggtgtatgcccttcggtattaaatcctctggaagtttacctc
atatctgctccacctgaaaacataacatttgaagatccttcgttagacgttattcttctt
ttgagagttctacatgctatcagtcgatactggtattatttgtatgataatgcaatctgc
aaggagataattccaacctcagagtttatcaacagtaaactgacagcaaaggcaaacagg
cagcttcaggatcctttggtaattatgacaggaaacataccaacttggctgacagagctt
ggaaaaacatgcccatttttctttccatttgatacccgtcaaatgctgttttatgtaact
gcttttgatcgtgatcgagccatgcaaagactactggatactaatccagaaatcaatcaa
tcagattctcaggacagcagagtggcaccacgactggacaggaaaaaacgcactgtgaac
agagatgagctgctgaaacaggcagaatctgtgatgcaggatctaggcagttcaagagcc
atgttggaaatccagtatgagaatgaagttggcacaggcctaggccccacactagagttc
tatgcacttgtatctcaggaactacagagagcagacttaggcctttggagaggagaagaa
gttactttagccaatccaaaaggaagccaggaaggtacaaagtacatacataaccttcaa
ggcctttttgcacttccttttggtagaacagccaagccagctcacattgcaaaagttaaa
atgaagttccgttttctgggaaaactcatggccaaggcaatcatggatttcagactggtt
gaccttcctcttggacttcctttttataaatggatgctacgacaggaaacttccttgaca
tcacatgacttgttcagtattgatccagtagtagccaaatcaatatatcaccttgaagat
attgtaagacaaaagaaaagacttgaacaggacaaaacacagaccaaagaaagtctacag
tatgcattggaggctttgactatgaatggctgctcagtggaagatctagggctggacttc
acacttcctggatttcctaatatagaactgaaaaaaggaggaaaagatacaccagtcacc
atccacaatttagaggagtatctcagattggttatattctgggcactaaacgaaggtgtt
gccagacagtttgattcattcagagatggatttgaatcggtgttccccctcagtcatctt
cagtacttctatcctgaggagttggagcagctcttgtgtggaagtaaaacggacacttgg
gatgccaagactttaatggaatgttgcagaccagatcacggttatacccatgacagtcga
gcagtgaagtatctctttgaaattctcagtagctttgatagtgagcagcaaagactgttt
cttcagtttgtaacgggtagccccagactgcctgtaggaggttttcgaagtttgaatcct
ccattgacaattgtacgcaagacatttgagtctacagagaatccagatgacttcttaccc
tcagtaatgacttgtgtgaactatctcaaattgccggactattcaactattgagataatg
cgtgaaaaactcttgatagctgcaagagaagggcagcagtcattccatctttcctga
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