Colius striatus (speckled mousebird): 104563186 Help Entry 104563186         CDS       T08355                                  Symbol SPG11 Name (RefSeq) LOW QUALITY PROTEIN: spatacsin   KO K19026   spatacsin Organism csti  Colius striatus (speckled mousebird) Brite KEGG Orthology (KO) [BR:csti00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:csti03400]     104563186 (SPG11) DNA repair and recombination proteins [BR:csti03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      104563186 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C DUF5703 Motif Other DBs NCBI-GeneID:  104563186 NCBI-ProteinID:  XP_010207859 LinkDB All DBs Position Unknown AA seq 2204 aa AA seqDB search VFDSFDGANLANINVGLCQGEVQGEDRSPAIPSPLTALRVSHDLSVAVVISSSSCALSVD LNIYFRQFPEHLLCKRDCEKLPVKPPEGLDEDELACSDYSMELLPLPFRTDRSWKAHLSS LCDTVRRRKPGSPHLVNDFNLPWYHFFTHLEGHGPDICETPEQTMVFVPRAVTWALAQPV QSSATNLSSAAQQWKQITTGAPREVVKLECKLVTGVKALFVVSTDEKGLTLVLWDLESQG VSRYAFGRESVSVDCSEELPLCLLLTEHGLSLVLFGLSQEEFLSRLMIYGSAGVVDSVCH LNGWERCSIPMHALEAGLENHQLDTVDLFLKSKESLLKLSAPCSGPEQAAETLSQSYLKN LEELRPALNLLCSAIKESDMEPHSKHFSEQLLNXFLSKQLEDIFVHTEEPDGFLQKGADV LSDYIIKLRKFLRKYPQVSTVHTACDLGEELPAIEESHVWEKLTPEEVIADAILSNKMPE AQTFFRMHQHPAQSLQEFIQTGLNLVYDRLLKDNTREASELLRNMGFDVKEELHKICFYT LDKHIRDLLVKVLQEENYFSEQEKKLIEFVHQVESSYSGSFQDKKEIQCLPSFKNWRKHQ DFSSHTDVLDSLLSRDRRGVHSSRVRVMFDWAQWWDEHLQEMILLPRKPRQELKTCNPEV LWMHLTAQHDWPNICSWIEESEPNQTLSGQATWPPLTADIVDQNTLCSSYMRHDILNKLA RNGIFVPSELEDFELLLQRLSYLGGVLQNPHPVPTYSAASGLDFHSRFVLHCLEHNLQYL LYTYLDYYRLTPSNCPILDNKELHEAHPWFEFLVQCRGVASAPQDPKMIFQASLANAQIL IPSNQASVSSMLLEGRTLLALATTMYAAGGIDQVLQNEDMEKPLKKVDPQLLKMALTPYP KLKAALFPPCTSHGILPPDISLYHLLQSLVPFDPKKLFGWQSANTLAVSDTSSEFPHFSS PELVNRYAIMERLDFLYYLHHGRPSFAFGTFLVQQLIKSKSPKQLIQQAGHEACSLALSS FSVPSVGAACVCFLELLGLDSLKLRVDMKVANRIFSYRTRNEESQHTQIRESLVEKLIKV ADGDKAAAAEVLISLEEAFWGAVEHQGINKTSSESRRQWGLVMQFCKLHGIELSTSYLKE CAKANDWLQFIIQAQLYSHQPEEVISILQDFTPILQDHLMLALEKFSLLSPGSSAASIPK SKHTDSLFQILLQCQGSSSPSRFLLAEGWREHAPILSVLAACFQDANIIHCLCVWILTTV DDTTKAEATNHLQSSAEHHEWDLHDLSLIWKVLLRRQKSKPLLHGFQLFLKDSPLLCVLE MYELCMSCKKYSEARTKLDNFQERLTELRREDEAAASALPVQWLESQALFLLELMMQQCR TEYELGKLLELFAAADNLLLNGPYVKKLWALSETLKDSSVSISRSILTSSTMERFQSECR SILEQLQGKGMFSLAREVAELAELPVDGVVTQEVLRELHRFRDTGQWHQNQTRVEFWKKC NDTFLRNSISSRAAAQFYSEQANTVLESSAHEKMSSIMERHLLLTLAGHWLAKDASVSLQ ELEALEKQLWLCRIARRATGCRTPPSQDAENSDLTFDNLAEEFSFSKLPALNSPEYLKLE ALACRGTQQSLSGPEEESLRFLLEGLLDEGRVHEASRVCHYFHFHHRDVSLVLHCRALAS GEAALDKLHTDIQTLLVAREEPAKSSTAEPSRVPSASSLEDWTHIVSPSPDDQVVASLKV LTDECVHGRNYCRQVLCLYELSKELNCPYSEMSALDPEKVLGAILSLPRAERCRRAQAFI STQRLQPTAVAELLAEQILHELLASAQHRGQKQVLSPAAESQAFLQLAKLCQDHTLVGMK LLDRVSSVPRGELSCITELLILAHNCFSLTCHMEGITRVLQAARLLTDEHLAPNEEYGLV VRLLTGIGRYNEMSYIFDLLHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHN MIALCFSMCREIGENHEAAACTQLKLIESQPWEESLHDVANLKKLLMKALTLFIDAAESY SKDSCVRQSLRCRGLTKLITLQLHFLNTGQSTMLINLSRHSLMDSILALPRFYQAAIVAE AYEFVPDWAEVLHQQVITKGDFTYLEEFKQQRPLRPSMFEEIAKKVKQHPPTDAALKNLK KLLAYCDDTYTYYRLAYDNKFYDVVNTLLKDPQTSCYLQDVLSS NT seq 6617 nt NT seq  +upstreamnt  +downstreamnt atgtgtttgactcttttgatggtgcaaatctggcaaacatcaacgtgggcctctgccagg gagaggtgcagggtgaggacaggagcccagccatcccatcccctctcactgccctgagag tgtcgcatgacctcagtgttgctgtcgtcatcagttcctccagctgcgccctctctgtgg atctaaacatctacttcagacagttccctgagcatttgctctgtaagagagattgtgaga agcttccagtgaagcctcctgaggggcttgatgaggatgagcttgcttgttctgactata gcatggagcttttgccgttgcctttccgcactgacaggtcctggaaggcacacttatcct cgctctgtgatacagtaaggagaagaaaaccaggttctccacatttggtgaacgacttca acttgccttggtatcattttttcacccatcttgaaggtcatggtcctgacatctgtgaaa ctcctgagcagacgatggtgtttgttccacgggctgttacgtgggcccttgcccagccag tacaaagcagtgccaccaacctcagcagtgcagcacagcagtggaaacaaatcaccacag gagcaccacgagaagtggtgaaactggagtgtaagctggtcactggagttaaagctttgt ttgtagtgtcaacagatgagaaaggattgactcttgttctctgggacttggagtcgcagg gtgtgagccgctacgcctttggcagagagagcgtgtctgtggattgcagtgaggagctgc ccttgtgtctgcttctgacagagcatggcctctccttggtgctgtttggtttaagccaag aggagtttttgagcagactgatgatctatggcagcgctggggtcgtggattctgtctgtc acctcaacggctgggagcgctgttccatccccatgcacgctctggaggcaggtctggaga accatcagctagacacagtagacttgtttttgaaaagcaaagaaagtcttctcaagctgt ctgcaccctgctctggacctgaacaggctgctgagaccctgtcccagtcatacctcaaaa atttggaagagctgaggccagccctaaacttgctgtgctcagcaatcaaggagagtgaca tggagcctcacagcaaacacttttctgagcagctgctgaacnntttccttagcaagcagc ttgaagacatttttgtgcacacagaggaacctgatggattcctgcagaagggggcagatg ttttaagtgattacattatcaaactcagaaaatttctgaggaagtatccacaagtcagca cagtgcacacagcctgtgatcttggggaggagctgcctgcgatagaggaaagtcacgtgt gggaaaagctgacaccagaggaagtcattgctgatgccatcttgagcaacaaaatgccag aggcccagaccttcttcaggatgcatcagcaccctgctcaaagtctccaggagtttattc agacaggtttgaatctggtctatgaccgtcttctgaaggacaacaccagagaggcctcag agctgctaaggaatatgggctttgatgtgaaggaggaattgcataagatatgtttctaca cccttgataaacacatccgagatttgttggtgaaagtgttgcaagaagaaaactattttt ctgaacaagagaagaaactgattgagtttgtgcatcaggtggaaagctcttactcaggat ccttccaggacaagaaagagattcagtgtcttcccagcttcaagaactggagaaagcacc aggacttttccagccacacagacgttctggactcgctgttgagtcgtgacagacgcgggg ttcacagcagcagggtcagggtgatgtttgactgggctcagtggtgggatgagcatctgc aggagatgattcttctccccagaaagccacgccaagaactcaagacgtgtaatcctgagg ttctttggatgcacttgacagcccagcatgattggcctaatatctgttcatggattgaag agtctgagcccaaccagactttgagtggacaagcaacctggccccctctcactgcagaca ttgttgaccagaacacgttgtgtagcagctacatgagacacgacatattaaacaagctgg ctaggaatgggatttttgtcccttctgagttggaagattttgaactcctcctccaaaggc tgtcttaccttgggggagtgctgcagaatcctcaccctgtcccaacatacagtgctgcaa gtggtttggacttccacagtcgttttgtgcttcactgtttagagcataacttgcagtatc tgttatacacttacttggactattacaggttgactccttcaaactgccccattttggata acaaggagttgcacgaagcacatccctggtttgaattccttgtgcagtgtcgtggtgttg ccagtgccccacaagatccaaagatgatttttcaggctagtctggcaaacgctcagatcc tgattcccagcaatcaagccagtgtgagcagcatgctgctggaaggacgaacgctcttag cactcgccaccaccatgtatgcagctggaggcattgatcaggttcttcagaatgaagaca tggaaaaaccactgaagaaagttgacccacagctcttaaaaatggcattgactccttacc ccaaactcaaagctgctctttttcccccatgtacttctcatgggattttgccacctgaca tctctctttaccatcttctccagtcattagtgccctttgatcccaagaagttatttggct ggcagtcagcaaatactcttgcagtatcagacacatcaagtgagttcccccacttttcat cccctgagctggtgaacagatatgccatcatggagagactggactttttgtactatttgc accacgggcgtccatcgtttgcttttgggacattcttggtccagcagttaataaagagca aatcccccaaacagctgattcagcaagcagggcatgaagcctgtagtctggctctctctt ccttcagtgtaccttcagtaggagcagcctgtgtgtgtttcctggagctgctgggtctcg acagcctcaagctcagggttgacatgaaagttgccaacagaattttcagttacagaacta gaaatgaagaatctcagcacactcagataagagaatctttggttgaaaagttaataaaag tggctgatggtgataaagcagcagcagcagaagttcttatctccttagaggaagcctttt ggggtgcagttgagcatcaaggaataaacaagacatcgagtgagtctagaaggcagtggg gtctggtaatgcagttctgcaaactccatggtattgagctgagcacatcttacctgaagg agtgtgccaaagccaacgactggctgcagttcatcatccaagcccagctgtacagccacc agccagaggaggtcatttctatccttcaggatttcactcccattttacaagatcacctga tgctggcactggagaagttctcccttttgagccctggaagcagtgctgccagcatcccca agagcaaacacacagatagtctcttccaaatccttcttcagtgtcaagggagctccagcc cttcacgtttccttttggctgagggatggagagagcatgctcccattctgagtgtgctag cagcatgtttccaggatgcaaacatcattcattgtctctgtgtttggatacttaccactg tggatgacactaccaaagctgaggcaacaaaccaccttcagagctcagcagagcatcacg agtgggatctgcacgacctgtcccttatctggaaagtcttgttaaggaggcaaaagagca aaccacttctgcatggcttccagctctttttaaaggactctcctttactgtgtgtgctgg agatgtatgaactgtgcatgagctgtaaaaagtacagcgaggccagaaccaaactggaca acttccaggaaagactcacagagctgagaagggaagatgaggcagcagcttcagcattac ctgtgcaatggctggagtcacaagcactgtttcttcttgagttgatgatgcagcaatgca ggacagagtatgagctgggaaagctcttggagctgtttgctgcagcagacaaccttctgc tcaatggcccttacgtgaagaaactctgggcactcagtgagaccctgaaggactcctccg tatcgatcagtcgttccatcctgaccagctccaccatggagaggtttcagagcgagtgca ggtccattctggagcagctgcaggggaaggggatgttctctctggctcgggaggtggcag agctcgctgagctgcccgtggacggtgttgtcacacaagaggttctaagagagctgcatc gtttcagagacactgggcagtggcaccaaaaccagacaagagtggaattctggaagaagt gtaatgacaccttcctgaggaactccatctccagcagagctgcagcacagttttactctg agcaggcaaacacagtgttggagtcttcagctcacgagaagatgagcagcatcatggaga gacatctgttgctcaccctagctggccattggctggccaaggatgcctctgtgtccctgc aggagctggaggccctcgagaagcagctctggctgtgtcgcatcgcacggcgagcgacgg gctgcagaacgcctccctcccaggacgcagagaacagcgacctcacctttgataacttag ctgaggagttttctttttcaaagctgcctgctctgaactcaccagagtatttgaaactag aggctcttgcatgcagagggactcagcagagcttgtccggccccgaggaggagtcgctgc ggttcctgctcgaggggctgctggacgagggccgcgtgcacgaggccagccgtgtgtgcc actacttccacttccaccacagagacgtctcactggtgctgcactgcagagccctggcct caggggaggctgctctggacaaactgcacacagatattcagactctgcttgtggcaagag aggagccagccaagagcagcacagctgagccgagcagagtcccgagcgcatccagcttag aagactggacacacattgtgtctccatctccagatgaccaagttgttgccagcctgaagg ttctcacagatgaatgtgtccatgggagaaactactgcagacaggttctctgcttgtatg agctttctaaggagttgaactgcccctacagtgaaatgtcagccctggaccccgagaagg tgcttggagccatcctgtcgttgccacgggcagagcggtgccgccgggcgcaggcgttca tcagcacacagaggctgcagcccacggccgtggcagagctgctggctgagcagatcctgc acgagctactggcttctgcacagcacagagggcagaaacaggttttgagccctgcagctg agagccaggcgttcctgcagctggccaagctgtgccaggaccacaccttggttggcatga agttactggatagagtttcctcagtgccacgtggggaactgtcctgcattacagaactgc tgattttggcccataactgcttcagcttgacttgccacatggaaggaatcactcgagttc tccaggcagcacggcttctcacagacgagcacctggcacctaatgaggagtacgggctcg tggtgcggctgctcacgggcatcggcaggtacaacgagatgagctacatctttgacctgc tgcacgagaagcactacttcgaggtgctcatgaggaagaaactggacccgagcgggacgc tgaagacggcgctgctggattacatcaagcgctgccggcccggggacagcgagaagcaca acatgatcgccctctgcttcagcatgtgcagggagatcggggagaaccacgaggctgctg cctgcacacagctgaaactcatcgagtctcagccctgggaggagtctcttcatgatgttg caaacttaaagaaactgctgatgaaagctctgactctcttcatcgatgcagcagaaagtt actccaaggactcgtgtgtgcgccagtccctgcgctgccgcgggctcaccaagctcatca cgctccagctgcatttcctcaacacggggcagagcacgatgctcatcaacctcagcaggc acagcctgatggattccatcctggccttgcccaggttctaccaggcagcgatcgtggctg aggcctacgagttcgtcccagactgggctgaagttctgcaccaacaagtgatcaccaagg gcgacttcacttacttggaagagtttaaacaacagagaccactgaggccaagcatgtttg aggagattgcaaagaaagttaaacagcacccacctactgatgctgctctgaagaacctga agaagctgctggcttactgtgatgacacctacacctactacaggctggcttacgacaaca agttctacgacgtggtgaacacgctgctgaaggaccctcagaccagctgctaccttcagg atgtgctgtccagctag

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