Colius striatus (speckled mousebird): 104563821
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Entry
104563821 CDS
T08355
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104563821 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csti03021
]
104563821 (TAF4)
03036 Chromosome and associated proteins [BR:
csti03036
]
104563821 (TAF4)
Transcription machinery [BR:
csti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104563821 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
104563821 (TAF4)
Chromosome and associated proteins [BR:
csti03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104563821 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
104563821
NCBI-ProteinID:
XP_010208696
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MATALSTRNGKIGTTTVQTLNGSNVVMNSHHTGSAAFSGTPVTANPASAPAVAPLVNNGP
GSVGKGNTVNAVLPSASNTVIQTSFLNTAVSSASSSSPTVISSQPPPSIGTGASTVTLVR
PPIHTAGPTVAAAGAATQNGSNTVINSTISVGSFSAVATATVGSGVSLQTSLVNSQSGST
VPAAPATQVIKSESPKTIVQAVSQQQTMATGGQPSTTGGNMIIGQTMQAGLSNVAPNPGG
IPPAAPGTPTGMAKGTANTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQN
FQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTV
QAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATA
VQTGTPQRTVQGTTATSTAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQN
LLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQ
ATIATIPSAAVLLSSSVQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQ
SQKAGALIRPPQVTLTQTPMVALRQPHNRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIA
TVSTQVAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRS
CKDETFLFPAPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQKNI
SYKDDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQ
KAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGSGSGTEGSGSTAAVPGSSGVGT
TRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgccttgtccaccaggaatggcaagattgggaccacaacagtgcaaactttg
aatgggagtaatgtggtgatgaactctcaccatacaggaagtgctgctttctctgggact
cctgtgacagctaaccctgcttctgcacctgctgtggcccctctcgttaacaatggaccc
ggatctgtggggaaaggaaatactgttaatgctgttttgccatcagcttccaacactgtc
atccagacttctttccttaatactgctgtgtcttctgcatcttcctcctcgcccacagtt
atctcttcacagccaccaccaagcattggaactggcgcatccacagtaacgcttgtaagg
ccaccgattcacacagcaggacccacagtagctgcagctggtgcagccacgcaaaacggg
agcaatactgtgatcaattcaaccatcagtgtggggagtttttctgctgttgctacagcc
actgtgggatctggagtttccctccagacatcgcttgtgaacagccagtctggttctact
gtgccagcagctcctgccacacaggtgatcaaatctgagtctcctaaaactatagtccag
gcagtatcccaacagcagacaatggctactggtggccagcccagtactacagggggtaac
atgattattgggcaaactatgcaagctgggctctccaatgttgctcccaatcctggtggg
atacctcctgcggctccgggcacccccacaggaatggctaaaggcactgccaatacagtg
gcacaaagtctgccaaggactccaacagcaacgacaagtggaatcagagcaactttgact
cctacagttttagcacctcgtttgcctcaaccacctcagaatccaactaacattcagaat
tttcagttaccaccaggcatggtccttgtgcgtagtgagaatgggcagttgctgatgatc
cctcaacaggccttggcgcagatgcaagcacaggcacatgcccagtctcagccccaaaat
actatgactcctcgtcctgctacacctaccagtgctcctccagtgcagatatcaacagtg
caggctccaggaacacctataattgcacgacaggtgacaccaactacgattattaaacaa
gtgtctcaggctcaaacaacagtgcaacccacaacaacgctacagcgtcctcccgttgtg
caacctcaaattgttctgggtggtactgcacaaacaactactctggggacagcaacagct
gtacaaactggaactcctcagagaacagtgcaaggaacaacagcaacctccactgctgcc
acagaaactatggaaaatgtgaagaaatgcaaaaactttctgtctacattaataaaactg
gcatcatctggaaaacagtcttcagagactgcagctaacgtgaaagaattggtacagaac
ctactggatggaaaaattgaagcagaagacttcactagcaggctgtacagagaacttaat
tcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgccttgagacag
ctaacaccagactctgcagctttcattcaacaaagtcaacagcagcagccgacgacgcaa
gcgacgatagcaacgattccatctgcagcggtgcttctgagctcctcagtccagcgcacg
gcggggaaggcaactgcaactgtaacgagtactctccaacaacctgtcatcagcctaact
cagcccacacaagttggtgtcagtaaacaagggcagtctacaccactggttatccaacag
tctcaaaaagcaggggcattgataaggcctccacaggtaacgttgacacagacaccgatg
gtagcattgcggcaaccacataatcgtattatgctcactactcctcaaattcaactgaac
caacttcagacagtacctgtggtaaaaccagcagtattacctggaaacaaagctattgcc
actgtttcgacacaagtagctgctgctcagaagaataaactgaaagaacctgggggaggc
tctttcagggatgatgatgatattaatgatgttgcatcaatggctggagtcaacctgtca
gaagaaagtgctcggatattggcaacaaactctgagctagtgggcacattaacaaggtcc
tgtaaagatgaaaccttccttttcccagcacctttacaaagaaggatattagaaataggt
aaaaaacatggaataacagaaatccatcctgatgtagttagctatgtatcacatgccaca
caacaaagactacaaaacctcgtggaaaaattatcagagactgctcaacaaaagaatatt
tcttacaaggatgatgaaagatatgaacaagcaagtgacgttcgggcacagctcaagttc
tttgaacaacttgatcaaatagaaaagcaacgtaaagacgaacaagaaagggaaatctta
atgcgtgcggcaaagtctcgatctcgacaagaagatccagaacagcttaggttgaaacag
aaggccaaggagatgcaacaacaagagctagcacagatgagacagagggatgcgaacttg
actgcattagctgcaatcggtcccaggaagaaaaggaaagtagattcgccgggatctgga
tcagggacagagggatctggttcaactgcagcagtcccgggcagctctggagttggaacg
accagacagtttacgcgacaaaggataacgcgggtgaacctcagggacctcatattttgt
ttagaaaatgagcgagagacaagccattcactattgctatacaaagcattccttaagtaa
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