Colius striatus (speckled mousebird): 104563950
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Entry
104563950 CDS
T08355
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
csti
Colius striatus (speckled mousebird)
Pathway
csti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104563950 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csti03019
]
104563950 (DHX36)
03012 Translation factors [BR:
csti03012
]
104563950 (DHX36)
Enzymes [BR:
csti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104563950 (DHX36)
Messenger RNA biogenesis [BR:
csti03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104563950 (DHX36)
Translation factors [BR:
csti03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104563950 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
ATPase
nSTAND3
AAA_14
NPHP3_N
AAA_23
PhoH
NACHT
Motif
Other DBs
NCBI-GeneID:
104563950
NCBI-ProteinID:
XP_010208863
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MDERREEQIVQLLSTVQTKTDKEQEAMSWWSGDEDGPTPEQPAKVKPVAAEKAPVSQRPV
FKKTFVDRDVEYLFEKNEQDADFDEQLREDLRKKKSDPRYIEMQRFREKLPSYGMRQELV
NLINNNRVTVISGETGCGKTTQVTQFILDDCIERGQGSTCRIVCTQPRRISAISVAERVA
AERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHIILDEIH
ERNLQSDVLMSIIKDLLAVRGDLKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYL
LEDVIEKLRYSPESSERRPRWKKGFMQGQVSRPDKEEKEKLYREQWPDYLQQLQGRYSAS
TIDALEMMDDEKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSD
RFVIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHF
DTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLE
ELCLQIKILKLGGIASFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLP
VEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHL
TVVNAFMGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLVAGFVNSRDPK
DPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVE
ETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQETIAVDEWIVFQ
SPARIAHLVKKLRQELDDLLQEKIESPCPVDWAAVDCRDTAVLTAIIDLITTQENQSVRN
YAPRFQGERYS
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcgcagggaagagcagatcgtgcagctcttgagtactgtccagacgaaaacc
gacaaggagcaagaagccatgtcctggtggtccggggatgaagatggacccactccagag
cagcctgcaaaagtgaaaccagttgctgctgaaaaagctcctgtaagtcagaggccagtc
ttcaaaaaaacatttgtggatcgtgacgtggagtatctgtttgagaagaacgagcaggat
gctgatttcgacgagcagcttcgagaggacctacggaagaagaaatctgatcctagatat
atcgagatgcagagattccgagagaagctgccttcgtatgggatgagacaggaacttgtg
aacctcatcaacaacaaccgggtgactgtgatcagtggggagactggctgtgggaagacc
acccaggtcacccagttcatcctggacgactgcatcgagcgcgggcagggctcgacgtgc
cgcatcgtgtgcacgcagccgcgccgcatcagcgccatctccgtggctgagagagtggct
gctgaacgggcagaggcgtgtggcaatggcaagagcacgggctaccagatccgtctgcag
agtcggttaccgaggaaacaaggttcaattttatactgcaccacaggaattgtcctacag
tggctccagtcagataagcacttgtccagcattagtcacataatcctggatgaaattcat
gaaagaaatctccagtcagatgttttaatgagcattattaaagaccttctggctgtccgt
ggggacctgaaggtgatactcatgagtgccactctgaatgctgagaagttttccgagtac
tttgataactgcccgatgatccacatacctggcttcactttccccgtggtggaatacctt
ctcgaggatgtcattgagaagctgaggtacagcccagagagcagcgagcggcggccgcgc
tggaagaagggcttcatgcagggccaagtcagcaggccggacaaggaggagaaggagaaa
ctctacagggagcagtggccagactacttacagcagctgcagggcaggtattctgcaagc
actatagatgccttggagatgatggacgatgagaaggttgacctggacctcatagcagca
ctgatcagacacatcgttttggaagaagaggatggtgcaattctggtgtttcttccaggc
tgggacaacattagcactctgcatgatctcttgatgtcacaagtcatgttcaagtcagac
aggtttgttatcatacctttgcattcactgatgcctactgtcaaccagactcaggtgttc
aagaagacccctccaggagtgaggaaaatcgtgattgccaccaacattgcagagaccagt
atcacgatagatgacgtcgtgttcgttatcgatggggggaaaataaaagaaactcacttt
gacacacagaacaacatcagcacaatggcagcagagtgggttagcaaagccaatgccaag
cagaggaaaggtcgagcaggaagagtccagccaggccactgttaccatctgtacaacggg
ctgcgtgccagccttctggatgattatcagctgccagagatcttgaggacacctctggaa
gaactctgcttacagatcaagattctgaagcttggaggaattgccagtttcctgagcaaa
ctgatggatccaccatctcgtgacgctgtcatgttggccataaaccatctgatggagctg
aatgctttggacaggcaggaagaactgactcctctgggtgtccacttggcacggctgcca
gttgagccacatattggaaaaatgatcctctttggagctttgttctgctgcttggacccc
gtgctgaccattgcagccagcctcagcttcaaagacccctttgtcattcctctgggcaaa
gagaaagtagcagatgcaagaagaaaggagctgtccaagaacaccaaaagtgatcacctg
acggtggtgaatgccttcatgggctgggaagagactcggcgtcgtggtttcagaacagag
aaagactactgctgggaatatttcctgtcttcaaatacacttcagatgctgcataacatg
aaaggacagtttgctgagcatctccttgtagctggatttgtgaatagcagagaccccaag
gatcccaaatctaataccaactcagacaatgagaagttgctgaaagcagtcatctgtgct
ggcctgtacccaaaggtggccaagatccgtcccagcttcagcaaaaagaggaaaatggtg
aaagtttgcaccaagacagatggaacagttaacattcatcctaaatcagtgaatgtggaa
gaaacagagttccattacaactggctggtgtaccatttgaagatgagaaccagcagtatt
tacttgtatgactgtacagaggtctctccttactgcctcttgttctttggaggagacata
tccattcagaaggacaaggaccaggagaccatcgctgtggatgagtggattgtcttccag
tctccagcacgaatagcacacttagtcaagaaattaagacaagagcttgatgatcttcta
caagagaaaatcgaaagcccctgtcctgtggactgggctgctgtggactgcagggacacg
gccgtgctgacagccatcatcgacctgatcaccacccaggagaaccagagcgtcaggaac
tacgctccccgcttccagggcgagcgctacagctga
DBGET
integrated database retrieval system
