Capnocytophaga stomatis: CGC58_01295
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Entry
CGC58_01295 CDS
T05529
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csto
Capnocytophaga stomatis
Pathway
csto03030
DNA replication
csto03430
Mismatch repair
csto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC58_01295
03430 Mismatch repair
CGC58_01295
03440 Homologous recombination
CGC58_01295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csto03032
]
CGC58_01295
03400 DNA repair and recombination proteins [BR:
csto03400
]
CGC58_01295
Enzymes [BR:
csto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC58_01295
DNA replication proteins [BR:
csto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC58_01295
DNA repair and recombination proteins [BR:
csto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC58_01295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
ATA88488
UniProt:
A0A250FWM3
LinkDB
All DBs
Position
275907..280370
Genome browser
AA seq
1487 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSDNWPRAVQIAWQLHDRHGKLIEHKDFLIAPDDFNIPY
DAEKVHGISTELAQQQGVSIHEVFTQFNEALQKSAYVVGQNIGFDINIMGAEFHRYGVES
PLTTLPVLDTCTEITAELCKIPGGRGGRFKLPTLTELHEFLFQEPFAEAHNATADVEATT
RCFFELIRIGEGFESKDISTEYISEFQQYNPTQIQPIGLKHINLKKASEEIRKEIQKQSG
SGLSQQEIDANIALLENAPFAHLHNHTQFSVLQATTSIQSLVKKTIQEKMPAVAMTDSGN
MMGAFHFIKEVLGHNKSAKAKNDEALEKGEIPTEIEIKPIVGCEFNICENHLDKSHQDNG
YQVVMLAKNKNGYHNLAKMASIAYTDGFYYVPRIDKNIVEKYKNDLIVLTGGMNGEVPSK
VLNIGEKQAEIALLWWKNLFGDDLYIELMRHQQEDENRVNQVLIELAKRHQVKLVATNNT
FYINQKDANAHDILLCVKDGEKQATPIGRGRGYRFGMPNQEYYYKSAEQMKTLFKDVPEA
ILNIQEIIDKIEIYNLAREVLLPKFQIPNEFLVEDDPDGKKGENKYLRNLTYLGAEKRYE
LPLSEEVIERLDFELMIIEKTGYPGYFLIVQDFIAAAREMGVSVGPGRGSAAGSAVAYCL
GITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSLVMDYVINKYGKNQVAQIITYG
TMAAKSSIRDTARVLDLPLHESDRIAKLVPNMKLAKIFSMDDKQLKEKLRSDELPKVHEL
KQIAEGTDLAAETLQQAQVLEGSVRNTGIHACGVIITPDDITNFVPVSVAKDSDLFVTQF
DNSVVESAGLLKMDFLGLKTLTLIKDSIELIKRRNGIEINPDEIPIDDKKTYELFQRGET
VGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIKRKHGTEPIVYDLDA
MEEYLKETYGITVYQEQVMLLSQKLAGFSKGDADMLRKAMGKKIFALLEKLKPKFVEGGI
KNGHPADVLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKANYPAEFMAAVLSNNMN
DIKQVSFFLEECQRMGIKVLSPDVNESFYKFTVNKDGNIRFGMGAIKGVGKNAVDTIVSH
RKDGNYSSIFDLAKRVDYKNINKKAFENIALAGGFDSFTKVHRAQYFHTESDGIPFLEKA
IRFGNKYQESKNSAQMSLFGGTNEVEIPEPTIPNCETWGNLEQLRREKEVVGIYISGHPL
DDFKHSLDHFCNLTLSQLQDLSPLINREISVAGMITDVQHRTSKNGKGWASFILEDYDGS
YEFKLFNDDYLKFRNYLVLGTFLFCKFGVKEGWQKKESNEKSEPRIIFNQMMVLQDVLEN
YSKKIALHLNVEEISKDLIKNYKEIIEKYHGNHPISFVIHNNKENIHLNMDNGQLKVDIS
KEFLDELDQKSVSYVLNDRKMEKLITKKKEEIEEEEQHLEVDLIEDN
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgtacctaattttcgataccgaaaccaccggattaccaaaaagatgggatgcaccaatc
acagattcagacaattggcctcgggctgtgcaaattgcttggcaactgcacgaccgccac
gggaagctcatcgagcataaagattttttgattgctcccgatgattttaacattccgtac
gatgccgaaaaagtacacggaatatccaccgaattggctcaacaacaaggagtttcaatt
cacgaggtattcacgcaatttaacgaagcgttacaaaaatcggcttacgtggtgggacaa
aacatcggttttgacatcaatattatgggggcggaattccatcgttatggtgtggaaagt
ccgcttaccacgcttcctgttttggatacgtgtaccgaaattacggccgaactttgtaaa
atacccggaggtcgtggcggacgatttaaactccctacactcactgagttacacgaattt
ctattccaagaaccttttgccgaagcccacaacgccactgccgacgtagaagccaccacg
cgttgttttttcgaactgatacgcatcggggaaggctttgaatcgaaggatattagcacg
gagtatatctctgaatttcagcaatataacccaactcaaattcaacctattgggctgaaa
catatcaacctgaaaaaggcttcggaggaaatccgtaaagaaattcaaaagcaatcggga
agcggattaagccagcaagaaatcgatgcaaatatcgctttgttggaaaacgcaccattt
gctcatttacacaaccacacacaattctctgttttacaagcaactacatccattcaaagt
ttagttaaaaaaaccattcaggaaaaaatgcctgctgttgcaatgaccgacagcggaaat
atgatgggggcttttcacttcatcaaggaagttttgggacacaacaaatccgccaaggca
aaaaatgatgaagccctcgaaaaaggcgaaattcctacagaaattgagataaaacccatc
gtaggttgtgaattcaacatttgtgaaaaccatttggataagagtcatcaagacaatggt
taccaagttgttatgcttgcaaaaaacaaaaatggttatcataatttggctaaaatggct
tccattgcctataccgacggattttattatgtgccacgaattgataaaaatatcgttgaa
aaatataaaaacgacctgattgtattaactggcggaatgaatggcgaagtgccttccaaa
gtgctgaatatcggtgaaaaacaagctgaaatcgccttactttggtggaaaaatcttttc
ggtgatgacctttacatcgaattgatgcgtcaccaacaggaagatgaaaatcgtgtcaat
caagtacttatagaacttgccaaaaggcatcaagtaaagcttgtagccaccaataacact
ttctatatcaatcagaaagatgccaatgcacacgatattttgctgtgcgttaaagacgga
gaaaaacaggcaactcctatcggaagaggtcgcggatatcgttttgggatgcccaatcag
gaatattattacaaatccgccgagcaaatgaaaactttgtttaaggatgttcctgaagcc
atcttaaatattcaagaaatcatcgataaaattgaaatttataacttggctcgtgaggtt
ttattgccaaaatttcaaattccgaacgaatttttggtagaagacgatcccgacggaaaa
aaaggagaaaacaaatatctcagaaatctgacttatcttggagcagaaaaacgttacgaa
ctacctctttctgaagaagttatcgaacgattggattttgagctgatgattatcgaaaaa
acgggatatcctggttatttccttatcgttcaggactttatagccgcagctcgtgaaatg
ggcgtttccgtaggtccgggaaggggttcggcagcgggttcggcagtggcttattgcctc
ggaatcaccaatatagaccccataaagtacgacttgctttttgagcgtttcctaaatcct
gatcgtgtgagtatgcccgatattgatatcgactttgacgacgaaggtcgctcattagta
atggattacgttatcaataaatacggaaaaaatcaggttgcacaaatcattacttacgga
acgatggcagcaaaatcctccattcgagatactgcccgcgtgctggatttgccattgcac
gaatccgatagaattgctaagctcgtgccgaatatgaagttggcgaaaatcttcagtatg
gatgacaagcaactgaaagaaaaattgcgttccgatgagcttccgaaggtacacgaactc
aagcaaatagccgaggggacggacttagccgccgaaacactgcaacaagctcaagttttg
gaaggttctgtccgaaatacagggattcacgcttgcggggttatcatcacgcctgatgac
atcaccaattttgtgcctgtttctgtcgctaaagattcggatttgtttgtaactcagttt
gataactcggttgtggaaagtgccggactgctcaaaatggatttcttggggcttaaaaca
cttacgcttatcaaagattcgatagaactcatcaaaagacgtaacggcatagaaatcaat
ccggatgaaattccgattgacgataaaaaaacatacgaacttttccaacgtggtgaaact
gtggggattttccaatacgagtcgcccggaatgcaaaaatatatgcgtgagcttaaaccc
actgtttttgccgatttgattgcgatgaacgctttgtatcgaccaggtccgttggagtat
atcccgagttttattaagcgtaaacacggcaccgaacccattgtgtatgaccttgatgcg
atggaagaatacctaaaagaaacttacggaattacggtgtaccaagagcaagtgatgtta
ctttcacagaagttagcgggattttccaagggtgatgccgatatgcttcgtaaagcgatg
gggaaaaagatttttgccctacttgaaaaattgaaacctaaattcgtggaaggaggcatc
aaaaacggtcatcctgccgatgttttggaaaaaatttggaaggattgggaagcctttgca
agttacgcttttaataaatcacactccacttgttatgcgtggattgcctaccaaactgcc
tatctgaaagccaactatccagcggaatttatggctgcggtgctttccaataatatgaac
gatattaagcaagtttctttctttttggaagaatgccaacgtatgggaatcaaggtgtta
agccctgatgtaaacgaatcgttttataaatttacggtaaataaagacggaaacattcgc
tttggaatgggagctatcaaaggcgtagggaaaaacgcggtggatacaatcgtttcacat
cgaaaagacggaaattactcatccatttttgatttagccaagcgtgttgattacaaaaat
attaataaaaaagcctttgaaaatatcgctttggctggaggttttgattctttcacgaaa
gtacatcgagcccaatactttcatactgaatcagatggaattccctttttggaaaaagca
atccgttttggaaataaatatcaggaaagtaaaaattccgcacaaatgagtcttttcggt
ggaactaatgaggtagaaattcccgaaccgacaattccgaattgtgaaacttggggcaat
ctggagcagttacgtcgtgaaaaagaagtggttggcatctacatttcggggcatccgctc
gatgatttcaagcattcgttagaccatttttgtaatcttacactttcacagctgcaagac
ctttcaccactgattaacagagaaataagcgttgccggaatgattaccgatgttcagcat
cgcacttcaaaaaacggcaaaggctgggcttcattcatcttggaggattatgacggttca
tacgagtttaaacttttcaatgatgattatttaaaattccgtaattatctggttttaggc
acatttctgttctgtaagtttggagttaaagaaggatggcaaaagaaagaaagtaacgaa
aaatcagagcctcgcatcattttcaatcaaatgatggtgcttcaagatgtattggaaaat
tattccaaaaaaatagctttacatctaaatgtagaagaaatttcaaaagatttaatcaaa
aattataaagaaatcatcgaaaaatatcacggaaaccatccaatttcatttgttattcac
aataataaagaaaatatccatctgaatatggataatggacagctaaaagttgatatttct
aaagaattccttgatgaattagaccaaaaatcggtttcatatgtgctaaatgaccgaaaa
atggaaaaactcatcaccaaaaagaaagaagaaatcgaagaggaagaacaacatcttgag
gttgatttaattgaagataattaa
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