Capnocytophaga stomatis: CGC58_01800
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Entry
CGC58_01800 CDS
T05529
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csto
Capnocytophaga stomatis
Brite
KEGG Orthology (KO) [BR:
csto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csto03016
]
CGC58_01800
Enzymes [BR:
csto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CGC58_01800
Transfer RNA biogenesis [BR:
csto03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGC58_01800
Prokaryotic type
CGC58_01800
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF7045
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
ATA88579
UniProt:
A0A250FTU4
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All DBs
Position
complement(388457..389206)
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AA seq
249 aa
AA seq
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MRYFIEFSYNGKNYHGWQNQPHSVSVQEVMEKSLSTLLRTQIEIVGAGRTDSGVHALQMF
AHFDVENPIDNQLVYKLNAFLPKDIAIYKIHRVKDDAHARFDAIKRTYEYHICTKKDAFR
YESSMYVNLPLDVQKMEEAAKLLFKYVDFQCFSKSNTDVKTYNCKIYEAFWKQEESLLIF
TISADRFLRNMVRAIVGTLIDVGLGKISLLDFQKIIESKNRCRAGASVPACGLFLKKVEY
SENIFLVND
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcgatatttcatagaattttcatacaacgggaaaaattatcacggatggcagaaccaa
ccacattcggttagtgttcaggaagttatggagaaaagtttgagtacacttttacgaact
caaatagaaatcgttggagctggacgaaccgatagcggagtgcacgctttgcaaatgttt
gcccattttgatgttgaaaatcctattgataatcagttggtttacaaattgaatgctttt
ttgcctaaggatattgccatttacaaaattcatcgcgtgaaggacgatgcacacgcccga
tttgatgcgataaaaagaacctatgaatatcacatttgcacaaagaaagatgcatttcgt
tatgaatcaagtatgtatgtgaatcttccgttagatgtgcaaaaaatggaagaggcggca
aaacttctttttaaatatgttgattttcagtgtttttcaaagtcaaatacggatgtgaag
acttataactgcaagatttatgaggctttttggaaacaagaagaatcgcttttaattttt
acgatttcagctgatcgttttttgcgaaatatggtgcgagccatcgtgggtacgttgatt
gatgtagggcttggaaaaatatcccttcttgatttccagaagattatagagagtaaaaat
cgttgtagggcgggggcttccgtgcctgcttgcggtctttttttgaaaaaagtagaatac
tctgaaaatatttttcttgtaaacgattaa
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