Capnocytophaga stomatis: CGC58_04620
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Entry
CGC58_04620 CDS
T05529
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
csto
Capnocytophaga stomatis
Pathway
csto00521
Streptomycin biosynthesis
csto00523
Polyketide sugar unit biosynthesis
csto00525
Acarbose and validamycin biosynthesis
csto00541
Biosynthesis of various nucleotide sugars
csto01100
Metabolic pathways
csto01110
Biosynthesis of secondary metabolites
csto01250
Biosynthesis of nucleotide sugars
Module
csto_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
csto00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CGC58_04620 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGC58_04620 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CGC58_04620 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGC58_04620 (rfbB)
00525 Acarbose and validamycin biosynthesis
CGC58_04620 (rfbB)
Enzymes [BR:
csto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CGC58_04620 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ATA89062
UniProt:
A0A250FV78
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Position
1053146..1054204
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AA seq
352 aa
AA seq
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MKKNILITGGAGFIGSHVVRLFVNKYPDYRIINLDLLTYAGNLENLKDIEKSPNYEFVKA
DICDFQAMKQLIESKNISGIIHLAAESHVDRSIKDPFTFAKTNVMGTLSLLQAAREVWNG
NWDGKLFYHVSTDEVYGALQMDNTLFTENTKYDPHSPYSASKASSDHFVRAYQDTYGLPT
VISNCSNNYGSYQFPEKLIPLFINNIRNNKPLPVYGRGENVRDWLFVEDHARAIDVIFHK
GKIGDTYNIGGFNEWKNIDLIRVIIKEVDKQLGRPEGTSEKLITFVTDRAGHDLRYAIDA
TKIKNELGWEPSLQFEEGIRLTVKWYLENQDWLDTITSGDYQKYYDQMYKNR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatattttaataacaggcggagctggatttataggctcacacgtggttcgg
ttgtttgtaaacaaatatcctgactacagaatcatcaatttggatttactaacctatgcc
ggaaacttggaaaacctcaaagatatagagaaatcacctaactacgagttcgtaaaggct
gatatctgcgactttcaggctatgaaacaactcatagagagcaaaaacatcagcggaatt
atccatttggcagcagaaagccacgtagaccgcagtattaaagacccttttaccttcgcg
aagaccaatgttatgggtacgctatcactcctacaggcagcacgtgaggtttggaacggc
aattgggacgggaaactgttctaccacgtctccaccgatgaggtttacggtgctttgcag
atggacaacacgcttttcaccgaaaacacaaagtacgacccacattcgccctattcggca
tcgaaagcctcgtccgaccacttcgttcgagcctatcaagatacctacggacttccgaca
gttatctccaactgctccaacaactacggaagctatcagtttcctgagaaattaatccca
ttattcatcaataacattcggaataacaagccactaccggtttacggacgtggcgaaaat
gtgcgagattggctcttcgttgaagaccacgccagagcaattgacgtgatattccacaag
ggcaaaattggcgatacgtacaacatcgggggctttaacgagtggaaaaacatcgacttg
atacgcgtcatcatcaaggaagtagataagcagctgggtcgccccgaaggaacctctgaa
aaactcattacctttgttactgaccgagcaggacacgaccttcgctacgctatcgatgcc
acaaaaattaagaatgagctcggctgggagccttccttacagttcgaagaaggaattcgc
ctcaccgtgaaatggtatttggaaaatcaggattggctggatactatcaccagtggcgac
taccaaaaatactatgaccagatgtacaaaaaccgatag
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