Capnocytophaga stomatis: CGC58_09035
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Entry
CGC58_09035 CDS
T05529
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
csto
Capnocytophaga stomatis
Pathway
csto03030
DNA replication
csto03430
Mismatch repair
csto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC58_09035 (holA)
03430 Mismatch repair
CGC58_09035 (holA)
03440 Homologous recombination
CGC58_09035 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csto03032
]
CGC58_09035 (holA)
03400 DNA repair and recombination proteins [BR:
csto03400
]
CGC58_09035 (holA)
Enzymes [BR:
csto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC58_09035 (holA)
DNA replication proteins [BR:
csto03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC58_09035 (holA)
DNA repair and recombination proteins [BR:
csto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC58_09035 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
VP7
ICEA
Motif
Other DBs
NCBI-ProteinID:
ATA90645
UniProt:
A0A250G1N0
LinkDB
All DBs
Position
2039510..2040517
Genome browser
AA seq
335 aa
AA seq
DB search
MNEVKKIIDNIKKGNIAPIYFLMGEEPYFIDVISDYIEENILSEDEKGFNQMVLYGQDVS
VADIINNAKRFPMMAPYQVIIVKEAQNLGNSVEDLVSYVENYTPTTVLVICYKYKTLDKR
KKLVKALGKNCVLFESKKLYDRDVMNWIPAILKEKGYAIHPQATQMLVEFLGTDLSRIQN
EIDKLTLIVSQNTEITPDIIERNIGISKEFNNFELRKAIGEKDEFKAVRIIRYFADNPKD
NPIVVTLGTLYSFFQQLLAYHGLSDQTDKNVASVLKINPYFVKEYHTAARNYPMKRVSAI
IAGLREVDMKSKGVGAVNAPQADLLKELIINILRN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtcaaaaaaattattgataatatcaaaaaggggaatattgccccgatttac
ttcctgatgggggaggagccttattttattgatgtgatttcggattatattgaggaaaat
atcctttcggaagacgaaaagggattcaaccagatggtactttatggtcaagatgtatcg
gttgccgatattatcaataatgcaaaacgcttcccgatgatggctccttatcaggtaatt
atcgtaaaagaagctcagaatttggggaattcggtggaagatttggtttcgtacgtggaa
aattacacgccaacaaccgttttggtaatctgctacaagtacaagactcttgataaacgc
aaaaaactggtgaaagctctggggaaaaattgtgttctttttgaaagtaagaaactttac
gacagagatgtgatgaattggattccagccattttgaaagaaaaaggttatgcaattcat
ccgcaagctacgcaaatgcttgtagagtttttgggaacagatttaagccgaattcaaaat
gaaatagataaacttactttgatagtttcgcaaaatacggaaatcactcctgatattatt
gaaagaaatataggaatcagcaaagaatttaataattttgaattacgaaaagcaattggc
gaaaaagatgaattcaaagcggtacgtattatacggtattttgctgataacccgaaagat
aaccctattgttgttactcttggtactctttacagtttttttcagcaacttttggcttat
cacgggcttagtgaccaaactgataaaaacgtagcaagtgtactgaaaatcaatccgtat
tttgttaaagaatatcatacggcagctcgcaactacccgatgaagagagttagtgccata
attgccgggcttcgggaagtagatatgaaaagcaaaggagtgggggcagtgaatgctcct
caagccgacctactcaaagaactaatcataaatatcttaagaaattaa
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