Capnocytophaga stomatis: CGC58_09220
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Entry
CGC58_09220 CDS
T05529
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csto
Capnocytophaga stomatis
Brite
KEGG Orthology (KO) [BR:
csto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csto03009
]
CGC58_09220 (rimO)
Enzymes [BR:
csto01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CGC58_09220 (rimO)
Ribosome biogenesis [BR:
csto03009
]
Prokaryotic type
ribosomal protein modification factors
CGC58_09220 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
ATA89889
UniProt:
A0A250FXJ2
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All DBs
Position
2077540..2078847
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AA seq
435 aa
AA seq
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MRTKSIKKNVINVVTLGCSKNVYDSEVLMGQLKAGGKQVVHEKEGNIVVINTCGFINNAK
EESINTILDYVQRKEEGLVDKVYVMGCLSERYKPDLEKEIPDVDQYFGTTELPALLKVLG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHRSTPIEDLVTEAEKLA
AKGVKELILIAQDLTYYGLDLYKERKLADLLRALVKVEGIEWIRLHYAFPTGFPMDVIEV
MKEEPKICNYLDIPLQHISDSILKSMRRGTSKEKTTKLLKDFREKLPEMAIRTTLIVGYP
GETEQDFNTLKEFVKEMRFDRLGCFTYSHEENTHAYNLVDDVPEEVKLQRANEIMEIQSQ
ISWELNQEKVGKTFRCLIDRKEGNYFIGRTEYDSPDVDNEVLIDAKKHYVKTGEFLMVKI
TDAADYDLYAEPINN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaatcaataaagaaaaatgttatcaatgtcgtgactttgggatgctccaaa
aacgtatatgatagcgaggttttgatgggacaattaaaggcaggaggaaagcaagttgtt
cacgaaaaagaaggtaacattgtggttatcaatacgtgcggttttatcaataacgccaaa
gaagaaagcataaataccattttggattatgtacaacgaaaggaagaagggcttgttgat
aaagtgtacgtaatgggctgtttgagcgaacgttataagcctgatttggaaaaggaaatt
cctgatgttgaccaatatttcggaacaaccgaacttccagcattgttgaaagttcttgga
gcagattacaaacacgagcttataggtgagcgacttaccacaacgccaaaaaattacgct
tacctaaaaattgccgaaggttgcgaccgtccgtgtagcttttgtgctattccgctgatg
cgtggaagtcaccgaagcacgcctattgaagatttggtcactgaagccgaaaaacttgct
gccaaaggagttaaggaattgattctgatagcacaagacctaacatattacggattagac
ctttacaaagaacgaaaattagcagatttgttgcgagctttggtaaaggtggaaggcatt
gaatggattcgattgcattacgcttttccgacaggcttcccgatggacgtgattgaggta
atgaaagaagaacctaaaatttgtaattatttggatattccgttgcaacacatttcagat
tccattttgaagagtatgcgacgtggtacaagcaaggaaaagacaaccaaattattgaaa
gattttcgggaaaaactacctgaaatggcaattcgtactactttgattgtaggctatccc
ggtgaaacagagcaggatttcaatacgttgaaagaatttgtgaaggaaatgcgtttcgac
cgattaggttgctttacgtacagccacgaggaaaacacgcacgcttataatttggttgat
gatgttccggaagaggtgaaattgcaacgagccaacgaaattatggaaattcagtcccaa
atttcctgggagttaaatcaggaaaaagttggaaaaacattccgttgtttaattgaccga
aaagaaggaaattacttcataggtcgtaccgaatatgattctccagatgttgataatgaa
gtacttatcgatgctaaaaagcattatgttaaaacaggagaatttttgatggtaaaaatc
acagatgcagcagattatgatttgtatgccgaaccaatcaataactaa
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