Capnocytophaga stomatis: CGC58_12425
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Entry
CGC58_12425 CDS
T05529
Name
(GenBank) transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
csto
Capnocytophaga stomatis
Brite
KEGG Orthology (KO) [BR:
csto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csto03000
]
CGC58_12425
Transcription factors [BR:
csto03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CGC58_12425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_Mga
GntR
Fe_dep_repress
Put_DNA-bind_N
HTH_24
MarR
Rrf2
HTH_34
HTH_5
NUMOD1
EAP30
HTH_PafC
HTH_36
MarR_2
LexA_DNA_bind
DUF7342
DDRGK
DprA_WH
IF2_N
Ribosomal_S25
HemN_C
RPA_C
AEP-like
HTH_41
HTH_IclR
MerR
Motif
Other DBs
NCBI-ProteinID:
ATA90469
UniProt:
A0A250FZ79
LinkDB
All DBs
Position
complement(2794809..2795576)
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AA seq
255 aa
AA seq
DB search
MKALNERQIKIVEALETTKYISVNELSERLNVSVVTIRKDLTLLEQEGYLHRTHGGASKQ
GRYVFDQTVSEKEMLNVEQKQKITNKALDYVKEGDFIILSSGTTIHLLAQKLPDNKNITV
LTPSLRVALDVCKKQNINTIHLGGEVRKNSTSTIGALAEETLNNFSCTTLFLGIEGIDLD
FGISTTNAGEAHLNKKMLERVDQVIVLADASKIHRRGFGFICYVEKIDVLITDASIDPEF
VEELEKRGVEVVIAL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcttaatgaacgtcaaatcaaaatagtagaagctttagagactacaaaatac
atcagtgtaaatgaattaagcgagaggttaaatgtatctgtagtgacaattcgtaaggat
ttaactctcttagaacaagaaggttatcttcatcgtacacacggaggagcgagcaaacaa
ggaagatatgtttttgaccaaaccgtctcggaaaaagaaatgcttaatgtggaacaaaaa
caaaaaatcacaaataaagcattggattatgtgaaagagggagattttatcattctttct
tcaggtacaacgattcatttgttagcacaaaaacttcctgataataaaaacattacggtt
ctcactccatcgcttcgggtggctttggatgtttgtaaaaagcaaaatatcaatacgata
catttgggaggagaagtccgcaagaattctacttccacgataggagctttggcagaagaa
acactgaataatttttcttgcacaactctctttttaggaatcgaaggaattgaccttgat
tttggtataagcaccacaaacgcaggagaggctcatttgaacaaaaaaatgttggaaaga
gttgaccaggtgattgtgcttgctgacgcttcaaaaatacaccgacgaggatttggattt
atatgttatgtggaaaaaatagatgtgttgattacagatgcttccatcgacccggaattc
gttgaagaattggaaaaacgaggtgtagaggttgtgattgctttataa
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