Capnocytophaga stomatis: CGC58_12555
Help
Entry
CGC58_12555 CDS
T05529
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csto
Capnocytophaga stomatis
Brite
KEGG Orthology (KO) [BR:
csto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csto03016
]
CGC58_12555 (truB)
Enzymes [BR:
csto01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CGC58_12555 (truB)
Transfer RNA biogenesis [BR:
csto03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGC58_12555 (truB)
Prokaryotic type
CGC58_12555 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
HerA_C
Motif
Other DBs
NCBI-ProteinID:
ATA90494
UniProt:
A0A250FZI8
LinkDB
All DBs
Position
2822755..2823477
Genome browser
AA seq
240 aa
AA seq
DB search
MTEHFLTTEQILEGQILLIDKPLHWSSFQAVNKIKWSIIKNYKLKKVKIGHAGTLDPLAS
GLLVICTGKFTKKITEFQDALKTYTGTIRLGAITSSFDLETEIEQTFPIEHITPELIEQV
RQKFVGEIEQTPPVFSAIKREGKRLYELAREGEETIEVPKRIVQIEQFNIDISNFPDIHF
EVVCSKGTYIRSLANDFGKALQSGAHLTVLRRTKIGDFSVENALSPDDFVEQNILNYRKN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacattttttaacaaccgaacaaattcttgaaggtcaaatattgttgattgac
aagcctttgcattggtcttcatttcaggctgttaacaaaataaagtggtctatcatcaaa
aattataagctcaaaaaggttaaaatcgggcacgctggaactttagacccgctggcttca
ggattacttgttatttgcacgggaaaatttaccaagaaaatcactgaatttcaggatgct
ctgaaaacttacacgggtaccattcgattgggagcaataacatcatcgtttgatttggaa
acggaaattgagcaaacatttcccattgagcatattacacccgaattaattgagcaggtg
cgacagaaattcgtaggcgaaatagagcaaactccgcccgttttttctgcaataaaaaga
gaaggaaaaaggctttatgaattggctcgcgagggagaagaaaccatagaagttcccaag
cgaatcgttcagatagagcaatttaacattgatattagcaacttccccgatattcatttt
gaggtagtttgcagtaaaggaacttacattcgttctttggcgaatgattttggaaaggct
ttgcaaagcggtgctcatttgaccgttttgagacgtacgaagattggtgatttttctgtt
gaaaatgccctttctcctgacgattttgtagaacaaaatatcttaaattatagaaaaaac
taa
DBGET
integrated database retrieval system
