KEGG   Corynebacterium striatum: CBE89_09530
Entry
CBE89_09530       CDS       T05059                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cstr  Corynebacterium striatum
Brite
KEGG Orthology (KO) [BR:cstr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cstr03400]
    CBE89_09530
Enzymes [BR:cstr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBE89_09530
    5.6.2.6  RNA 3'-5' helicase
     CBE89_09530
DNA repair and recombination proteins [BR:cstr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CBE89_09530
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr DEAD WH4_Lhr WH2_Lhr Helicase_C ResIII AAA_25 PhoH DUF6406 TetR_C_31
Other DBs
NCBI-ProteinID: ART21711
UniProt: A0A2Z2J536
LinkDB
Position
complement(2011579..2016537)
AA seq 1652 aa
MSKNILGRFRPQVGQWFEDVFAAPTPVQEQAWDKISQGTHALVVAPTGSGKTLAAFLWAL
NSLVEKEGQTALPVGPAVRGGAQGVKVLYISPLKALGVDVENNLRAPLNGIARTAERLGL
DVPDITVGVRSGDTPSAERARQIRKPPDILITTPESAYLMLTSKAAGILASVDTVIIDEI
HALAGTKRGVHLALTLERLAAVAGEFQRIGLSATVRPLSAVSNFLGGDRPVDIVAPPAQK
RWQLDVHVPVEDMSDLPTPEQGSTIGEMTIDDPLGITGTFDGAGLQASDSALPTAKSIWP
FIEEDLYSEIMEHRSTLVFVNSRRTAERLTSRLNELYAQEHDPESLSPATRRDPAQLMKQ
VDVAGTAPAVIARAHHGSVSKDERLLTETMLKEGSLRAVVATSSLELGIDMGAVELVVQV
ESPPSVASGLQRVGRAGHFVGAVSQGSFYPKHRADLVQSTLTVSRMREGLIEEMHSPRNP
LDVLAQQTVAAVAAAEVAPVTVRGVQPGTEGCGEADGVRGLDADTWYSMVRRAWPYRDLA
REVFDSVIDLVSGVYPSTDFSELKPRVVYDRITGMLSPRPGAQRVAVTNGGTIPDRGMFG
VFLPAGGENTGPRRVGELDEEMVYESRVGDIFTLGATSWRIEEITRDQVIVTPAPGHTGR
LPFWNGDQAGRPYELGQALGAYRREVHQDPSVVQDADENAARNIAAYLQEQYEATGIIPD
EKTLVLERFKDELGDWRVVLHSPFGRGVNAAWALAVGQRVAELTGMDPQAVAGDDGIVLR
LPEGEKEPDGSLFVFDADEITDIVTEQVGGSALFASRFRECAARALLLPRRNPGKRAPLW
QQRQRAEQLLDVARKYPSFPIILETVRECLQDVYDLPALTETMRELGHRRIRIAEVTTEQ
PSPFASTLLFNYTGAFMYEGDSPLAEKRAAALALDPALLSKLLGTVELRELLDPEIIAQV
HAQLQRTAEDRRARTTEEVADLLRLLGPIPVAEMAEHTNVPLSAIESLGARVMRVRIGGR
EHFAQPLDAPLLRDALGVPVPPGIPAQQATIADALQQLVSRWARTRGPFVLRDLQDAFGL
SASTAHTALQSIDTIVEGRYRQGIEEAEYCAGEVLRTIRSRSLAAARAATEPVSAATFGR
FLPDWQQVAPVGKRPALRGADGVFSVIEQLAGVRLPASAWESLILPARVGDYSPTMLDEL
TANGEVLIVGAGKAGANDPWIMLLPADYAAQLAPQIEPEELGLSMLQSATLEVLQRGGSF
LFGDILSQVPGTADELREALWSLVEMGLVSPDSFAPIRTHVATAGSRSGATAHRAKRRPT
RSRLRMGRTSFAQSQGLGGASAAPDVAGRWAASVSGHGVDATSRSVAHGEAWLDRYGVLT
RGSVVAEDVLGGFALAYKVLSGFEESGKAMRGYVIEGLGAAQFSTPAVIDRLRGLADTPD
VTGWPSGARSMVDVDCFVLAATDPANPYGAALPWPERDGSGGGNGPTRSAGALVVLMDGL
CVAHLTRGGKTLTTFLDALPEGIDHTEVLATLISALTKLIAAGRLSPLVVEKANGAAIFE
TPLANTLRSVGAGITPRGIRVSGKAAAPRTSRRIEDNRSDPWQKPLEPRRGRTVSEALDE
LGDHGDLSFDDEPPFDPPNGAPGGFRPRGYRR
NT seq 4959 nt   +upstreamnt  +downstreamnt
atgtcaaaaaatattcttggccgtttccgcccgcaagtagggcagtggtttgaggatgtt
ttcgcagcgcccacgcctgttcaggaacaagcctgggacaagatttcgcaaggcacgcac
gcgctcgtggtagccccgactggttctggtaaaaccttggcggcctttctgtgggcacta
aattccttggtggaaaaggaagggcaaaccgccttgcccgtgggcccggcagtacggggc
ggggcgcagggagtgaaggtgctgtatatctccccactgaaggcgctcggcgtggacgtg
gagaacaacctgcgcgcgccgctcaatggcatcgcgcgcacggcagagcgcttggggctc
gacgtgccggatatcaccgtgggcgtgcgctccggggatacgccctcggccgaacgcgca
cggcagatccgtaagcctccggacatcctcataaccacgccggaatcggcctacctcatg
ctcacttccaaggcggcgggcatcctggccagcgtggatacggtcatcatcgacgagatc
cacgcgcttgccggaaccaagcgcggcgtccacttggcgttgactctggaacgtctggcc
gcggtggctggcgagttccagcgcatcggactttcggctacggtgcgtccgctttcggcg
gtctctaacttcttgggcggagatcgccccgtggacattgtggccccaccagcgcagaag
cgctggcagctcgatgtccatgtgcccgtggaggatatgtctgacctgccgacgccggag
caaggctccaccatcggggagatgaccattgacgatccgctgggtatcaccggcaccttc
gacggggctggcctgcaggcttcagactccgccttgcccacggccaagtccatctggccc
ttcatcgaggaggacctctactccgaaatcatggagcatcgctcgaccctcgtctttgtg
aactcgcggcgcactgcagagcgtcttacctcccggcttaacgagctctacgcgcaggag
cacgatccggaaagcttgtcgccggccacgcgccgggacccggcgcagctgatgaagcag
gtcgacgtcgccggcacagcgcctgccgttatcgcccgtgcacaccatggttcggtgtct
aaggacgagcgcctgcttacggagacgatgctcaaggaaggctcgctgcgtgctgtggtg
gccacgagttcgttggagctcggcatcgacatgggcgcggtggagctggtggtgcaagtg
gaatcacctccttcagtggcttctggcctgcagcgcgtgggccgcgccgggcactttgtc
ggtgcggtttcgcagggctccttctatcccaagcaccgggcggacctggtccaatcgacg
ctgacggtctcccgcatgcgcgaaggcctcattgaggagatgcattcgccgcgtaatcct
ctggatgttttggcgcagcagacggtggcggcggtggctgctgccgaggttgcgccggtg
actgtgcgcggtgtgcagccgggtactgagggctgcggggaagccgacggcgtgcgcggc
cttgatgctgatacctggtattccatggtgcgccgcgcctggccttatcgtgacctggcc
cgggaggtcttcgactcggtcatcgacttggtctctggggtttatccctcgactgacttc
tcggagctcaaaccccgcgtggtctatgaccgcatcacggggatgctgagcccgcgccca
ggcgcgcagcgagtggccgtgaccaacggtggaaccatccctgaccgcggcatgttcggt
gtctttctgcctgcgggtggggagaacaccggcccgcgccgcgtgggtgagctcgacgag
gagatggtctacgagtcccgcgtgggagacatctttactctgggcgccacgagctggcgc
atcgaggagatcacccgcgaccaagtcatcgtgactcccgcaccggggcacaccgggcgc
ttgcccttctggaatggtgatcaagccgggcgcccgtatgagctgggccaagcgctgggt
gcgtaccgccgcgaagtccaccaggacccgtccgtcgtgcaggatgccgacgagaacgcc
gcgcgaaatatcgcggcctacctccaggaacaatacgaggctacaggcatcatcccggat
gaaaagacgctggtgctcgagcgcttcaaggacgagctaggggactggcgcgtggtcctg
cacagcccgtttggccgcggcgttaatgccgcgtgggcgctggccgtggggcagcgcgtg
gcggagctgaccggcatggacccacaggcggtggccggtgatgacggcatcgtcctgcgc
cttcccgaaggggagaaggagccggatgggtcgttgttcgtcttcgacgcagatgagatt
accgacatcgtgacggagcaggtgggcggttccgcgctctttgcttcgcgcttccgcgag
tgtgccgcgcgtgcgcttctgttgccgcggcgcaaccccggcaagcgcgcccccttgtgg
cagcagcgccagcgtgcggagcagcttctcgacgtcgcccgcaagtatccctcgttcccc
atcatcctggagacagtccgcgagtgtctgcaagacgtctacgacctacccgcgctgaca
gagaccatgcgggagttgggacaccgacgcatccgcattgctgaggtcactacggagcag
ccttcgccttttgcctctacgctgctgtttaattacaccggcgcgtttatgtacgagggc
gattccccgctggcagaaaagcgcgcggctgccctagccctcgacccagctttgctgtcg
aagctgctgggaacggtggagctgcgggagttactcgacccagaaatcatcgctcaagtc
cacgcacagctgcagcgtacagccgaggaccgccgcgcccgcaccacggaggaagtcgcg
gacctgctgcggttgcttggccccattcctgtcgcggagatggctgagcacacgaatgtc
ccgctcagcgccatcgaatccttgggtgcgcgcgtgatgcgggtacgcattggcggccgc
gagcacttcgcgcagccactcgacgctccgctgcttcgcgacgccctcggcgtccccgtt
ccgcccggcatcccggcgcagcaagccaccatcgcagatgccctgcagcagctcgtctcg
cgttgggcacgcacccgcggcccattcgtgctgcgggatctgcaggatgctttcggcctg
tcagcatcgactgcgcacacagcgttgcagtccatcgacaccatcgtagaaggccgctac
cgtcaaggcatcgaggaagcagagtattgcgcgggcgaggtgctgcgcacgattcgttcc
cgttccctggctgccgcgcgcgccgcgacggaacctgtcagtgcggcgacctttggccgc
ttcttgccggactggcagcaggtggcccccgtgggcaagcgcccagccctgcgcggtgct
gatggagtctttagcgtgattgagcagctcgcgggtgtgcgtttgccagcctcggcgtgg
gagtcgctcatcttgcccgcgcgagtgggggactattcgccgacgatgctcgatgagctc
accgcaaacggcgaggtgctcatcgtcggtgcaggtaaggctggtgcgaatgacccgtgg
atcatgctgctgcctgccgactacgcggcgcagctggctccgcagattgaaccagaggag
ttggggcttagcatgctgcagtcagcaacgctggaggtcctgcagcgcggcggtagcttc
ctgttcggtgacattctttcccaggtgcccggcaccgcggatgagctgcgcgaagcgttg
tggtcgctggtggagatgggcctggtcagcccggattcctttgcgccgattcgcacgcat
gtggccacggcgggctcgcggtcaggggctactgcacaccgcgctaagcgacgccccact
cgttcccgcctgcgcatgggccgcacgtcttttgcccagtcgcagggactcggcggcgca
agtgcggctccggacgtggccgggcgctgggcagcgtcggtttctggacacggtgtggat
gcgacgagcagatcggtcgcgcacggcgaggcatggctcgaccgttacggcgtgctcact
cgcggttcggtcgtggctgaggacgtactcggtggtttcgcgctggcgtacaaggtgctc
tccggttttgaagagtccggcaaggccatgcgcggttacgtcattgaggggctcggcgct
gcgcagttttccaccccggcggtaattgaccgcctgcgcggattggccgacacgcccgac
gtcaccggctggccctcgggcgcgcgctccatggtggacgtggattgcttcgttctggct
gccacggacccggctaacccctatggtgcggcgttgccgtggccggaacgcgatggctcc
ggcggcgggaatgggccaacgcgcagcgccggtgctctcgtggtcctgatggacggtcta
tgcgtggcgcacctgacccgtggcggcaagacgctgaccacgttcctcgatgctctgcct
gagggaatcgaccacactgaggtgctggccacgcttatatctgcgctgacgaaactcatc
gctgcaggccggctgagcccgctcgtcgttgagaaggctaacggcgcggccatcttcgag
accccgctggcgaatacgctgcgctcggtgggcgcgggaatcacgccccgcggcattcgc
gtctccggcaaggccgcggcaccgcgaacctcgcgccgcatcgaggacaaccgcagcgat
ccatggcagaagccgctggaaccacgccgcgggcgcaccgtgtccgaagcgcttgatgag
ctgggcgaccatggcgacctaagcttcgacgacgagccacccttcgacccgcccaatggc
gcgccgggcggtttccggccgcggggctatcgccgctag

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