Corynebacterium striatum: CBE89_10045
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Entry
CBE89_10045 CDS
T05059
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cstr
Corynebacterium striatum
Pathway
cstr03420
Nucleotide excision repair
cstr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cstr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBE89_10045
03430 Mismatch repair
CBE89_10045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cstr03400
]
CBE89_10045
Enzymes [BR:
cstr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBE89_10045
DNA repair and recombination proteins [BR:
cstr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBE89_10045
MMR (mismatch excision repair)
Other MMR factors
CBE89_10045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ART21794
UniProt:
A0A2Z2J4Q2
LinkDB
All DBs
Position
complement(2115615..2118824)
Genome browser
AA seq
1069 aa
AA seq
DB search
MNSQSNLLSPAELATGLGKEFPPTPEQAKVIEGELGPKLVVAGAGAGKTETMASRVVYLV
ANGMVAPEKVLGLTFTRKAAQQLEQRIRKQLIKLRDSGIVQPGTAAAEALENIAPKVATY
DSYAGDLVREYGLLMPVEPTARIITDAERYAIAHDVVVNYGGKLSASQSLGHVTETLLKL
AQAMDNGLLDPDEIREHARIFTATAYDLEKTRKNGPEFTRDLQKYLDKQQLRVEYLLLVE
ALKEEQAARGVITFGEQMAIAAALAESHPQVGEQQSQRFNVVMLDEYQDTSHAQRVLLRS
LFGGVRAGVSVTAVGDPMQSIYGWRGATAENLAAFVEDFPQADGSPAPKDQLTISWRNPQ
QTLTLANDVAGHLFAETGGPRPVDELSPRDNAPEGEVKLAYFASENEEREFVANHLKAQL
DACEDPSRFSAAVLVRTNKQSPLISQALDAIGVPNEIVGLGGLLWQPEIQDLIAVATILL
RPQDTNAALRVLTGPMCGLGVKDLKELLARQRNLAGASVESAGRLRWEGGDPVEHLAAQL
AELTKEDTSQVLGLADALADLGERERYSAAGLARMEELSAKLRHLRTYSLSKSLSDLFAD
IEAMFNIRTEVLANGQLGGTTHLDTFADIVAGFHGDSLGALLDYLSMAREHEDGLTPGEV
PAVEGRVQIMTVHKSKGLEWKHVCVLHADSSSYKAQAETFLTLVERAPTDEDVIELEPDA
VKRSAFEKACDAYKASVRQNQREEAARLFYVAMTRTESTLTVTGSGTNRKGGKAQKGPYE
YLELLREKHSDLVSHWDVPATPEEAEALITLREGTFPSLHANPDALRGADLVLDAMEELP
ALRAGETFELWEQEAGALIEEYAALKAPVVDVELPTELTASDMVSLSSDPIQFARRQRRP
VPFKPNAYAKRGTAFHAWLEERFGSPALLSEYELPGSDEQPEQDLESLKEAFLASPWAQR
TPEFVEAPFEITIGESVVRGRMDAVFREADGTWLIVDWKTGRPPAGAAMRAAEIQLAVYA
EAWRRVHKAENVRAAFFYVRDGYLFEPSNLPTGKKLVELLESSVSGQAG
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgcagtctaatcttctcagcccggcagagcttgccactggcctgggcaaggag
tttccgccgaccccggagcaggccaaggtaatcgagggcgagctcgggccaaagctcgtg
gtggcgggtgccggtgcgggcaagaccgagacgatggcttcgcgcgtggtctatttggtg
gccaacggcatggtagcgccggaaaaggtcttggggctgacgtttacccgcaaggccgcg
cagcaactcgagcaacgtattcgcaagcagctaatcaagttgcgtgactcgggaatcgtg
cagcctggcacggccgcggcggaggctttggaaaacatcgcgccaaaggttgccacctat
gactcctacgcgggcgacttggtgcgcgaatacggtttgctcatgcctgtggagccgaca
gcgcgcatcattaccgatgctgagcgctacgccatcgcacacgacgtggtggtcaattac
ggcggcaagctgtcggcctcgcaatcgttgggccacgtgacggagaccttgctcaaactg
gcgcaggccatggacaacggtttgttggacccagacgagatccgcgaacatgcacggatt
ttcacggccaccgcttatgacctagaaaagactaggaagaatggtccggagtttacccgt
gatctccagaaataccttgataagcagcagttgcgcgtggagtatctgctactggtggag
gccctcaaggaagagcaggccgctcgcggcgtgattaccttcggtgagcaaatggctatt
gccgcggccttggcggagagccatccgcaggtgggcgagcagcagagccagcgattcaac
gtcgtcatgctggacgagtaccaggacacctcccatgcccagcgcgtgttgctgcgctcc
ttgttcggcggggtccgcgccggtgtttcggtgaccgcagtgggcgaccctatgcagtcc
atttatggctggcgcggtgccacggcagaaaaccttgctgccttcgttgaggacttccct
caagcagacggttcgccggcgccgaaggaccagctcaccatttcgtggcgtaacccacag
caaacgctgacgctggctaacgacgttgccgggcacctgtttgcggaaaccggcgggccg
cgcccagttgatgaattgtcgccgcgcgataacgccccagaaggcgaggtgaagttggcc
tacttcgccagcgaaaacgaggaacgcgagttcgtagcgaatcacctcaaggcgcagctg
gatgcgtgcgaggatccgagccgctttagcgcggcggttctggtgcgcaccaacaaacag
tcgccgctcatttcgcaggccttggacgcaatcggcgtgcccaatgaaatcgttggtttg
ggcggactgctttggcagcctgagatccaagacctcattgctgtagcgaccattctcctg
cgcccgcaggacaccaatgctgccttacgcgttctcaccggcccgatgtgtgggttgggt
gtgaaggacctcaaggagctgctggctcgccaacgcaatctggcgggggcaagtgttgaa
tccgcaggccgtcttcgctgggaaggcggcgatcctgtcgagcaccttgccgcgcagctg
gccgaactcaccaaggaggacacgagccaggtcttgggccttgccgacgccctcgcagat
ttgggcgagcgggagcgctacagcgcggctggccttgctcgcatggaagagctttcagcg
aaactgcgtcatctgcgtacctactcgctgagcaagtcactgagcgatctctttgcggac
atcgaggcgatgttcaacattcgcaccgaggtgctggcaaacggacagctgggcgggacg
acgcaccttgatacattcgccgacattgttgccggattccatggggactccttgggagca
cttctggactacctctccatggcgcgtgagcacgaagacggcctgaccccgggcgaggtt
ccagctgttgaaggtcgcgtgcaaatcatgaccgtgcacaagtccaagggcttggagtgg
aagcacgtgtgcgtgctacacgctgactccagtagttacaaggcccaggcggagaccttc
ctcaccctcgtggaaagggcgcccactgatgaggacgtcattgagctcgagcccgatgct
gtcaagcgctcggcatttgaaaaggcctgcgatgcctataaagcatcggtccgccagaac
cagcgggaagaggctgcccgcctgttctatgttgcgatgacgcgtaccgagtccaccctc
accgttactggttcaggcaccaaccgcaaaggtggcaaggcacaaaagggaccttatgaa
tacctggagctgctgcgcgagaaacactcggacttggtcagtcactgggacgttccagcg
actcctgaggaggccgaggcgctcatcacccttcgtgagggcacgttcccgtcgctgcac
gctaacccggatgcgctgcgcggtgctgatctcgtgctggacgcaatggaagagctgccg
gcattgcgggcgggggagaccttcgagttatgggagcaagaagccggagccctcatcgag
gaatacgcggcgcttaaggcccctgtggttgatgtggagctgccgaccgagctgaccgcc
tccgacatggtgtctttgagctccgatcccattcagttcgcgcgccgccaacgccgacca
gtgcccttcaagccgaacgcctacgcgaagcgcggtaccgccttccacgcgtggctggag
gagaggttcggttcaccagccttgctgtctgaatacgagctgcctggttctgatgagcag
ccagagcaagacctggaatcactaaaggaagcattcttggcttcgccgtgggcgcagcgc
acaccagaattcgtcgaagcaccctttgaaatcaccatcggtgagtcggtcgtccgcggc
cgaatggatgccgtattccgcgaagccgacggaacctggctcatcgtggactggaagact
ggccgtccgcctgccggtgcagcgatgcgtgccgccgagatccagctcgccgtctatgca
gaggcttggcggcgagtgcataaggcggagaatgtacgcgctgctttcttctatgtccgt
gatggctatctcttcgaaccgagtaatttgcccactggaaagaagctagtagaactcctt
gaatcgtcagtttcaggtcaggcgggctaa
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