Corynebacterium striatum: CBE89_11770
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Entry
CBE89_11770 CDS
T05059
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cstr
Corynebacterium striatum
Pathway
cstr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cstr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBE89_11770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstr03021
]
CBE89_11770
03400 DNA repair and recombination proteins [BR:
cstr03400
]
CBE89_11770
Enzymes [BR:
cstr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBE89_11770
Transcription machinery [BR:
cstr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBE89_11770
DNA repair and recombination proteins [BR:
cstr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBE89_11770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ART22097
UniProt:
A0A2Z2J674
LinkDB
All DBs
Position
complement(2469824..2473816)
Genome browser
AA seq
1330 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDTEAEIAERAAKLEQD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFLKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRSFDLEAEAEELKEIINNGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKAEGEIGGE
GRYTEATENGPATGVYSSYAEAIMARDRGVLGLQAPIKVRISHLRPPAEVEAEQFPDGWQ
KGQAWMAETTLGRIMFNDLLPWNYPYLEGVMVRKGGAKNSVLLGDVINDLAAKYPMITVA
QVLDKMKDAGFYWATRSGVTITMDDVLVLPNKTEVLESYEKEAQRIERKYWEQGALTERE
RYDRLVELWKDATDTVGKAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVRVPLGELVNGTPVFDELWETSASGRVVASDVKAEDGTVVAEAGTDLTEELTA
EILRAGVTEIKVRSVLTCQTPAGVCAKCYGKSMASGKLVDIGEAVGIVAAQSIGEPGTQL
TMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPDD
GSDNVVYEKLSKRQGLAQVRRPMESNPEAMIERSLRDGDHVTTGERLMRGAADPHDVLEV
LGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIDSGTTDFLPGVLVDLS
EAKQINAAQVAEGGEPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDQ
LIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTGA
SVPLDEDFTF
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaatctcttcgacgagctccgcatcggtctcgccactgccgatgacatt
cgccgttggtctaagggcgaggttaagaagcctgagaccatcaactaccgcaccctgaag
ccggagaaggacggcctcttctgcgagcgcatcttcggtcctacccgtgactgggagtgt
gcttgtggtaagtacaagcgcgtccgctacaagggcatcatttgtgagcgctgtggcgtc
gaggtcaccaagtccaaggtgcgccgtgagcgcatgggacacatcgagctcgccgctccg
gtaacccacatttggtacttcaagggcgttccttcccgcctgggctaccttctggacctt
gctccgaaggacctggagcgcatcatttacttcgctgccaacatcatcacctccgttgat
gaagaggcacgccacaacgatcagtccaccctggaagcagagatgctcctggagaagaag
gatgttgaggatgacaccgaggcagagatcgctgagcgcgctgcaaagctcgagcaggat
ctggctgagctggaggctgctggagccaaggctgacgcacgccgcaaggtgcagaacgct
gctgacaaggagatgcagcacatccgcgagcgcggcgagcgcgaggttgcacgcctggac
gagatttggaacaccttcctgaagctggctccaaagcagatgatcatcgacgagaccatc
tacgaagagctcgtcgaccgctacgaggattacttcaccggcggcatgggtgccgaggct
atccagaccctcatccgcagcttcgatctcgaggctgaggctgaagagctcaaggaaatc
atcaacaacggcaagggccagaagaagatgcgcgctctcaagcgcctcaaggtcgttgct
gcattcctgcgctcaggtaacgatccggctggcatggtcctggatgcaattccggttatc
ccgccagagctgcgcccgatggttcagctggacggtggccgctttgctacctccgacctg
aacgacctctaccgccgcgttatcaaccgcaacaaccgcctcaagcgcatgatcgatctc
ggtgctcctgagatcatcgtaaacaacgagaagcgcatgctgcaggagtctgttgacgcc
ctcttcgacaacggccgtcgcggccgtccggtcaccggaccaggcaaccgtccgctgaag
tccctgtctgacttgctcaagggcaagcagggccgtttccgtcagaacttgctgggtaag
cgtgttgactactccggccgttccgttattatcgtcggtccgcagctcaagctccacgag
tgtggtttgccgaagcttatggctctcgagctgttcaagccattcgtcatgaagcgtctg
gtggaaaacgactacgcccagaacatcaagtccgctaagcgcatggttgagcgccagcgc
cctgaggtgtgggacgttctggaagaggctatttccgagcacccagtgatgctgaaccgt
gcacctaccctgcaccgtctgggtatccaggcattcgagccgaagctcgttgagggtaag
gcaattcagctgcacccgctggcttgtgaggcgttcaacgctgacttcgacggcgaccag
atggcagttcacctgccgctgtccgccgaggctcaggcagaggctcgtgtcctcatgctc
gcttccaacaacattctttccccggcatccggtaagccactggctatgccgcgtctggac
atggttaccggtctttactacctgaccatggacaaggctgagggcgagatcggcggcgag
ggtcgctacaccgaggccaccgagaacggtccggctaccggcgtttactcctcctacgct
gaggcaatcatggctcgcgaccgcggcgttctgggtctccaggccccgatcaaggtccgc
atctcccacctccgcccgccggcagaggttgaggctgagcagttcccagatggttggcag
aagggccaggcatggatggctgagaccacccttggccgcatcatgttcaatgacttgctg
ccttggaactacccgtacctcgagggtgtcatggtccgcaagggcggcgctaagaactcc
gtactgctcggtgacgtcattaacgacctcgctgctaagtacccgatgatcaccgttgcc
caggttctggacaagatgaaggatgccggtttctactgggcaacccgctctggcgtgacc
atcaccatggacgacgttctggtccttccgaacaagaccgaggttctcgagtcttacgag
aaggaagcacagcgcatcgagcgtaagtactgggagcagggtgcgcttaccgagcgtgag
cgttacgaccgcctggttgagctctggaaggacgctaccgacaccgttggtaaggcagtc
gaggatctctacccggatgacaacccgattccaatgatcgttaagtctggtgcagcaggt
aacatgcgtcagatctggaccctggccggtatgaagggcatggtcgtgaactccaagggt
gactacatcacccgtccgattaagacctccttccgtgagggtctgtcggtcttggagtac
ttcaacaactcgcacggttcccgtaagggcctggccgataccgcactgcgtaccgctgac
tctggctacctgacccgtcgtctcgtcgacgtggcgcaggacgtcattgtccgcgaagag
gattgtggtacccgccagggcgtccgcgttccgctgggcgagctggttaacggcaccccg
gtattcgatgagctgtgggaaacctctgcttccggccgcgttgtcgcttctgacgtcaag
gctgaggacggcaccgttgttgctgaagctggcaccgacctgaccgaggagctcaccgca
gagatcctgcgcgctggtgttaccgagattaaggttcgctccgtactgacctgtcagacc
ccagccggcgtttgtgcgaagtgctacggcaagtccatggcctccggcaagctcgtcgac
atcggcgaggcagtcggcattgtggctgcgcagtccattggtgagccgggtacccagctg
accatgcgtacgttccaccagggtggtgtcggtggcgacattaccggtggtctgccacgt
gtgcaggagctgttcgaggctcgtaacccgaagaaccgtgcgccgatcgcttccgttgac
ggcactgtgtccctgtctgatgaaggcaacttctggaccctgaccattactccggacgac
ggttcggacaacgtggtttacgagaagctgtcgaagcgtcagggcttggcacaggtccgc
cgcccgatggagtccaacccagaagctatgatcgagcgttccctccgtgatggcgaccac
gtcaccactggcgagcgtctgatgcgtggtgctgctgacccgcacgacgtgcttgaggtt
cttggccgccgtggtgttgagaagcacctcatcgacgaggttcaggctgtttaccgtgca
cagggtgtggctattcacgataagcacatcgagatcatcatccgccagatgctgcgtcgc
ggtaccgtcattgattccggcaccaccgatttcctgccgggtgttctggttgacctctcc
gaggccaagcagatcaacgctgcacaggttgctgaaggaggcgagccggctcagctgcgc
tcggagatcatgggtatcaccaaggcttccttggctaccgagtcctggctgtctgcggcc
tccttccaggagaccacgcgcgtgcttaccgacgccgctatcaacaagcgctccgatcag
ctcattggtctgaaggagaacgtcatcatcggtaagctgatcccggctggtaccggtatc
tcgcgttaccgcaacatctctgttaagccgaccgaggccgcacgcaacgctgcgtactcg
atcccgacttacggcgattccatctacggcgacgatggcttcggtgagttcaccggcgca
tccgtcccgttggatgaggacttcaccttctaa
DBGET
integrated database retrieval system
