KEGG   Stygiolobus caldivivus: KN1_18980
Entry
KN1_18980         CDS       T07597                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
csty  Stygiolobus caldivivus
Pathway
csty03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csty00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    KN1_18980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csty03021]
    KN1_18980
Transcription machinery [BR:csty03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     KN1_18980
 Prokaryotic type
  Archaeal type
    TFE
     KN1_18980
SSDB
Motif
Pfam: TFIIE_alpha HTH_11 HTH_20 Rrf2 WSLR Fe_dep_repress IF2_N HTH_PafC HTH_9 DNA_ligase_ZBD DnaD_N TrmB GntR F-93_WHD HTH_IclR Sigma70_r3 Zn_ribbon_IS1595 Zn_ribbon_Top1 zf-Mss51 CTU2 HTH_DeoR TSKS Zn_ribbon_3 Zn_ribbon_TFIIB Mut7-C Rad50_zn_hook
Other DBs
NCBI-ProteinID: BCU70601
UniProt: A0A8D5U6S1
LinkDB
Position
1939262..1939801
AA seq 179 aa
MSEKTDALILELAKELVGEDAADLLKYLLKKRSEITDEELAKELNVKPNEVRKKLYLLSE
QGFVTSRKTKDKDSSLFIYYWRVNLDQINDVLLNRKRMILDKLKIRYEQEKDSLFYFCPQ
DNIKYNMDEALENEFKCPKCGSPLQYYESEKARQFLEQKIKQLEEEIEKETKRGKNNNN
NT seq 540 nt   +upstreamnt  +downstreamnt
atgagtgaaaaaactgacgcattaatacttgaattagcaaaggaattagtaggagaagat
gcggcagatttgcttaagtatttacttaaaaagagatctgaaatcacagatgaagaatta
gcaaaagagttaaacgttaaacctaacgaagtaagaaaaaaactatatttactatctgaa
caaggtttcgtaactagtagaaaaacaaaagataaggattctagtttgtttatatactat
tggagggtaaacttggatcaaataaatgacgtgttgttgaataggaaaaggatgatatta
gataagcttaaaataaggtacgagcaagaaaaggattctcttttctatttttgccctcaa
gataatataaagtacaatatggacgaggcgttagaaaatgagtttaagtgtccaaaatgc
ggaagcccgctacagtactatgagtcagaaaaagcaagacaattcttagagcaaaaaatt
aaacagttagaggaagagatagaaaaagagactaaacgtgggaagaataacaataattga

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