KEGG   Stygiolobus caldivivus: KN1_19180
Entry
KN1_19180         CDS       T07597                                 
Name
(GenBank) RNA-binding protein
  KO
K03679  exosome complex component RRP4
Organism
csty  Stygiolobus caldivivus
Pathway
csty03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csty00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KN1_19180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csty03019]
    KN1_19180
Messenger RNA biogenesis [BR:csty03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     KN1_19180
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     KN1_19180
SSDB
Motif
Pfam: ECR1_N_2 KH_6 KH_1 RRP4_S1 RRP40_S1 S1 KH_2 Chol_subst-bind KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: BCU70621
UniProt: A0A8D5ZJH7
LinkDB
Position
1954467..1955222
AA seq 251 aa
MVENAAPKIFYQDRSIVTPGDLIAEGDLQVSWSPYFYKIGNKYYSAITGLLSVKEGNVFE
VIPLEGQHYYPRIGDTVLGLIEDIEIYGWVADIKSFYSAYLPASSLLGRAITPGEDLRRF
LNIGDYVIAKVEAFDRTINPVLTVKGKGLGRVSSGVVVEISPAKVPRVIGKNKSMLEVLT
SETGCDVQVAQNGRILIKCANSLSEEALVSAINIIQSESHIKGLTERIRAYLREKLGGSR
NDASAEAKANT
NT seq 756 nt   +upstreamnt  +downstreamnt
gtggtcgaaaatgcggctccaaaaattttctaccaagatagatctattgtgacaccagga
gatttaatcgcagagggtgacttacaagtatcatggtctccttatttttacaagataggg
aataagtattattcagcgataacaggccttttaagtgttaaggaaggaaatgtatttgaa
gttatcccattagaaggacagcattactatcctagaataggagatacggtgttaggactg
atagaagacatagaaatttatggatgggttgctgatatcaaatcattttattcagcttat
ctacctgcttcatcgttgcttggaagggctataaccccaggtgaagacctaaggcgtttc
ttgaatataggagattacgtaatagctaaagtagaggcctttgataggactattaacccg
gttcttactgttaaaggtaaaggacttggtcgagtctcatctggagtagtggtagaaata
tcaccagctaaggttccaagagttatcggtaagaataagagtatgttagaagttttaaca
tcagaaaccggttgtgatgttcaagttgctcaaaatggaaggattttgataaaatgtgca
aatagcttaagcgaggaagcattagttagtgctattaatataatccaatcagaatctcat
ataaaaggcttaacagaaagaataagagcttatttgagagagaaattaggtgggagtaga
aatgatgcaagtgcagaagccaaggctaatacttga

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