Stygiolobus caldivivus: KN1_21030
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Entry
KN1_21030 CDS
T07597
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
csty
Stygiolobus caldivivus
Brite
KEGG Orthology (KO) [BR:
csty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
KN1_21030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csty03021
]
KN1_21030
03019 Messenger RNA biogenesis [BR:
csty03019
]
KN1_21030
Transcription machinery [BR:
csty03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
KN1_21030
RNA polymerase I system
KN1_21030
Messenger RNA biogenesis [BR:
csty03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
KN1_21030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
Holin_9
Motif
Other DBs
NCBI-ProteinID:
BCU70806
UniProt:
A0A8D5U8P5
LinkDB
All DBs
Position
2087261..2087719
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AA seq
152 aa
AA seq
DB search
MEAPKFRNYYAVRVTAGQEINVALMIEERIKTNNVKEIYSIVVPPSVKGYVIVEASGPHV
VKLVVTGIRHVKGVAHGLVQKEDVVKFVSKTVSLPTIKEGEIVEITSGPFRGMQAEVKRL
DSAKNEVVLNILESSFPLQVTVPVDQVKPVKK
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
ttggaagctcctaaattcaggaattattatgctgttagggtcaccgcgggacaagaaata
aatgtcgcccttatgatcgaggagaggataaaaaccaataacgtaaaggaaatttactca
attgtcgtaccacctagtgtgaagggttatgttatagtagaggcttccggccctcatgtc
gttaagttagtagtgaccggtatcaggcacgtcaaaggtgtagcccacgggttagtccag
aaagaagacgtcgttaaattcgtatccaagacagtatccctacctactataaaagaagga
gaaatagtagagataaccagcggtccctttaggggaatgcaggccgaagtaaagaggtta
gacagtgcaaagaatgaagtagttttaaatattttagaatcatcatttccacttcaggtt
acagtacccgttgaccaggtgaaacctgttaaaaagtaa
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