Stygiolobus caldivivus: KN1_23640
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Entry
KN1_23640 CDS
T07597
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csty
Stygiolobus caldivivus
Brite
KEGG Orthology (KO) [BR:
csty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csty03400
]
KN1_23640
Enzymes [BR:
csty01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KN1_23640
DNA repair and recombination proteins [BR:
csty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KN1_23640
Prokaryotic type
KN1_23640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCU71067
UniProt:
A0A8D5U8C4
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All DBs
Position
complement(2348956..2350248)
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AA seq
430 aa
AA seq
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MKCGFIFRRDLRLYDNTGLVEASYDCDEIIPLFIVDPRQMLHNNYKSEFASSFMINSLVE
LDAELRDKWGAKLNIFFGNAEEVIKKLDVDAIYVNEDYTPFALERDEKMKENALSRGIKF
LSFTDVLLTTKNIKPSKSFSAFYKKAIQYKVREPRDIRDGVNFTVIKDSLDVEFLKSFKK
TESPLLKGGRSEGLKLLERKVDFKRRDFPAERNYTMLSPHLKFGTISIREAYYKKRDDQA
FIRELYWRDFYTLLAFYNPYVFGHCYKREYDGINWESNEEYFEAWKNGRTGYPIVDAAMR
SLNSTGFINGRLRMIVAFFLTKVLFIDWRWGERYFASKLIDYDPAINNGNWQWVASTGTD
YIFRVFDPWKQQEKFDPDAKFIKEWVEELRDYPPSIIHKVYEYNIPTYPKPIVDWRERVE
YVKRVFSFEQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatgtggatttattttcaggagagatttaagactgtatgataatacgggtctggta
gaagcgtcttatgattgtgatgaaataatcccattatttatcgttgatccaaggcaaatg
cttcataataactataagtcggaatttgcttcttcgtttatgattaactctctagtagaa
ctagacgctgaattgagagataaatggggagcaaagttaaacatattctttggtaatgca
gaggaggtaataaagaaacttgatgtggatgctatatatgttaatgaagattacacacct
tttgctttagaaagagatgaaaagatgaaggaaaacgctttatctagggggattaaattc
ttatctttcacagacgttttattaaccacaaaaaatataaaaccatccaaaagtttttcc
gcgttttacaagaaggcaattcaatataaagtacgtgagcctagggatatcagggatgga
gttaactttactgtcataaaagacagtctagacgtggagttcttaaagtcatttaaaaaa
actgagtcccctttgcttaaaggagggcgatctgagggtttaaaactgctagagaggaaa
gtagactttaaaaggagggattttccagcagagagaaattatactatgttatcccctcac
cttaagtttggtacaatttccattagagaggcatattataagaaaagagatgaccaagcg
tttatacgagaactgtattggagggatttttacactctcttagcattttataacccttat
gtgtttggccattgttataaaagagaatacgatgggataaattgggagagtaatgaagag
tattttgaagcatggaagaacggaaggaccgggtatcctattgttgatgctgcaatgagg
tccttaaatagtaccggttttataaacgggaggcttagaatgatcgtagccttctttctg
actaaggtcttgtttatagactggaggtggggcgagaggtatttcgcgtctaaacttata
gattatgatcctgctatcaataacggtaactggcagtgggtagcatctaccggcacagat
tatattttcagggtctttgacccttggaaacagcaagaaaaattcgaccctgacgcgaag
ttcataaaggaatgggtggaagagcttagagattacccgccttcaataatacataaagtt
tatgaatataatataccaacgtaccctaaacctatagtagactggagagaaagagtagag
tatgtaaaaagagtttttagctttgaacagtag
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