Stygiolobus caldivivus: KN1_23780
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Entry
KN1_23780 CDS
T07597
Name
(GenBank) radical SAM protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
csty
Stygiolobus caldivivus
Brite
KEGG Orthology (KO) [BR:
csty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csty03016
]
KN1_23780
Enzymes [BR:
csty01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
KN1_23780
Transfer RNA biogenesis [BR:
csty03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
KN1_23780
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Motif
Other DBs
NCBI-ProteinID:
BCU71081
UniProt:
A0A8D5U7N0
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Position
complement(2357691..2359085)
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AA seq
464 aa
AA seq
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MLVRKPIRMLSGVTVVSVMTAPSRCPHGKCIFCPGGVDYNTPQSYYGKEPTLMRAIENSY
DPFYQVQSRLRQYEANGHIPSKVELIIMGGTFLATPLDYQEWFVTQALEGMNRYPDSSKP
GFVYLEEAQLRNESANIRCVGMTVETKPDWGKEREAKQMLRLGATKVELGVQTVYDELLM
RSNRGHTVKDSIESTRILKDRGFKVVYHVMLGLPGSDPDKDLEGFKRLFSDPDFMPDMLK
IYPTLVVETAPLAEVWKRGLYKPYDTETLVELISEMYRFIPPWVRVMRVQRDIPAPIILD
GNKKGNLRELVEKRALEKGVKINEIRFREVGVRWLHTGEIPRGEPKLRKYVYEASKGLEV
FLSFEFDDGTVVGYLRLRKPSDVEKISIVRELHIYGLETPVGLWDDLSFQHKGYGSKLLA
EAEKISVDELDAKRILVLSGIGAREYYRKKGYKNAYPYMEKELV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgaggaaacctataaggatgctatctggtgttacggtcgtctcagtaatgact
gctccctctaggtgcccgcacggtaaatgtattttctgcccgggaggtgtggattataac
actccccaaagctactacggaaaggagcctactctaatgagggctattgagaatagctac
gaccctttttatcaagtacaatctagactgaggcagtatgaggctaacgggcatatcccg
agtaaggtcgagctgattataatgggagggactttcttagctactcccctagattatcaa
gaatggtttgtgacacaagcattagaaggtatgaataggtatcccgactcatcaaagccc
ggttttgtttatttagaggaagcccagctaaggaatgagtcagccaatatcaggtgtgtc
gggatgacagttgagactaagcctgactggggtaaggagagagaggctaagcagatgcta
aggctcggggccactaaggtagaactaggagtacagacagtatatgacgaactacttatg
agaagtaatagggggcatactgttaaggactcgattgagtcgactaggattttaaaagat
aggggctttaaggtcgtctatcacgtaatgctgggcctaccgggttctgaccctgacaaa
gaccttgagggctttaagaggcttttttcagaccccgatttcatgccggacatgttgaaa
atttaccctacactggtggtagaaactgcacctctagctgaggtatggaagagggggtta
tataaaccctacgatactgagacattggtcgagcttatatctgaaatgtatcgtttcatc
cctccttgggttagggtaatgagggtccagagggacatccctgcccctataatactagac
gggaacaaaaaggggaatttgagggaactcgtagagaaaagggctttagaaaaaggcgtg
aaaataaatgagataaggtttagagaagtcggggtaaggtggttacatactggggagata
cccagaggagaaccgaagttaagaaagtatgtctatgaagccagtaaaggtttggaagtt
ttcctttctttcgagttcgatgacggtactgtagtaggctacttgaggctaagaaagcct
tctgatgtagaaaagataagtattgtgagagagctccacatttacggccttgagacacct
gtagggctgtgggatgacctcagttttcaacataagggatacggttctaagttgttggct
gaagctgagaagatatctgttgatgaactcgacgctaaaaggatcctcgtactttccggt
ataggggctagggaatattataggaagaaggggtacaaaaacgcttacccttatatggag
aaggaactggtctag
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