Candidatus Caldarchaeum subterraneum: CSUB_C0026
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Entry
CSUB_C0026 CDS
T02904
Name
(GenBank) helicase domain-containing protein
Organism
csu
Candidatus Caldarchaeum subterraneum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
PLDc_2
ResIII
DEAD
nSTAND3
Flavi_DEAD
AAA_22
IstB_IS21
Cas3-like_C_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
BAJ49895
UniProt:
E6N3A1
LinkDB
All DBs
Position
24242..27322
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AA seq
1026 aa
AA seq
DB search
MAKIIDNKKETLAFVLNKEFSEVDEIAIASAYFNVRGYGAIAQGLGDKPMKLLLGREPTE
TIKWEDEILQELEQFEDDADYFRLLQKTIQYFKDDKRLVRIMERRFFHGKAFIGVSLDKK
EVRRGIGVVGSSNLTYGGLVSNRELNMLNTDREVVQELAEWFEEQWNQSRDFKEEFISLL
SNYVTSWSPYEVVAKALYETYKGSLIERETKMLKHLYPHQQLTYIDAKEKLEKYGGVLIA
DSTGLGKSRVALALAHEAIREGIRPLLIAPKSILETTWEAEMNETLVRIDTLSTEMLSQN
PDIVDDYVGEKGPELIIVDEAHYFRRSSTNRYIALRELVNKNQAKIVLITATPVNTSLMD
LYSLLSLYLPENCIADLNHQSLYEYFVTQQRRWLAGEPINMDDILRRFIVRHSRELAKAL
DREGRIRFPKRVFDEKIGRYPITISLDEIYKKLENLSLAFYDLSIERLSAQFRLPDGTRI
EKKDPTQVENLKNLVKTIFIINLFKRLESSYAAFEETLRRMLSYIRAAKHYATKFSVFIP
PKMRGDILNLFPDVEEREDEIPFEEFPAPEELFSKPRYKGLYNECKLSKQEAEEFVANCS
KDEEAIESLLRMLPNHDEKYFLLERRLQQIMKQIKEPNGVIIFTQYADTAHYLYRRLKAS
FNRVMLVTGAGGYNDKGEKALEDHIVRRFQKVGGLLISTDVLSAGQNLQNAQYVANYDFP
WNPVVLIQRVGRIDRIGSNYDIVYLINVLPRNGDPDDPESLEHFLGLMQRLYKRLEMIRG
TIGLDASTLGEEAAPRDFSIQAMIARNDERVLKILEQKIEQFTKDPIDILARILNEKGLQ
WVERIPNGIGAIKRGTLNGIFALLTDGDNFYWRLHVLDKDKEKIITSPTEIVDLLLEGES
DNRGEKLEYDKLIPLLVMVKESLKKELEEVMRRETTAMGPPRVDKKTRTVFDALSQLGDE
GERLASMFRRVASKPAIVNHLYRAYLEGKLLEEARKILPKAVQEIATTNPETKELRRVCW
CYFTKT
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaagataattgataacaagaaagaaaccctagcattcgtcctgaacaaagaattc
tccgaagtagatgaaatagcaatagcgtccgcctacttcaacgtaagaggctacggagct
atagcgcagggtcttggagacaagcctatgaagctactcttggggagggagccaacggag
acgataaaatgggaagacgagatacttcaagagcttgagcagtttgaggacgacgctgat
tacttccgactgctccagaagacaatccagtacttcaaggatgataagcggctggttagg
ataatggagaggaggttcttccacggaaaggccttcatcggtgtctccctcgacaagaag
gaggttagaaggggtataggtgtggttggtagcagcaacctcacttacggaggtctcgta
agcaacagagagctaaacatgcttaacaccgatagagaggttgtccaagaactagctgaa
tggtttgaggagcagtggaaccaatccagagacttcaaggaagaattcatctcactactt
agcaactatgtaacgtcatggagcccctatgaagtggtggcgaaagcactgtacgagacc
tacaagggaagcctaatagaacgagaaacaaaaatgctcaaacatctttacccgcaccag
cagctaacctacatagacgcaaaggagaagctcgaaaaatacggtggtgtattgatagca
gactctacaggcctaggtaaatcgagggtagcgctagccctagcccatgaagcgataaga
gaagggatacgccccctcctcatagctcccaaatcgatactggaaactacatgggaggcc
gagatgaacgagaccctcgtaagaattgacacgctttccacggaaatgctctcacaaaac
cccgacatagtagatgactatgttggagaaaaagggccagagctaatcatagtcgacgaa
gcccattactttagaagaagctcaaccaatagatacatagctctaagagagctggtaaac
aagaatcaggcgaagatagtgctgataaccgcgacaccagtcaacaccagcctcatggac
ctatactccctcctaagcctatacctaccagagaactgcatagcagacctaaaccatcaa
tcactgtatgaatacttcgttacccagcagagaagatggctagctggagagcctataaac
atggacgatatactgcgcagattcatagtgagacactccagagaactagcaaaagcccta
gatagagaaggaaggataagattcccaaaaagagtatttgacgaaaagataggaagatac
cccataaccataagccttgacgaaatctacaaaaaactggaaaatctcagcctagccttc
tacgacctctcgatagagaggctatcggcacaattcaggctacccgacggaacaagaata
gaaaagaaagacccaacacaggtagagaacctgaaaaacctagtaaaaacgatattcata
ataaacctgttcaagaggcttgagagcagctacgcagccttcgaagagacgttgaggagg
atgcttagctacataagagcagcaaagcactacgctactaagttctcggtattcataccg
cccaaaatgaggggagacatacttaacctattccccgatgtggaagagagggaggatgag
ataccgttcgaggaattcccagcacccgaggagctcttctcaaaacccagatacaaaggc
ctatacaatgaatgcaagttaagcaaacaggaagccgaggaattcgtagccaattgctca
aaagacgaagaagccatagaatcgcttctacgcatgctacccaaccacgatgaaaaatac
ttcctactagaaagaaggctccaacagattatgaagcaaatcaaagagcccaacggcgtc
ataatctttacacaatacgcggacactgcccattatctctacagaaggctgaaggcttcg
ttcaaccgagtgatgctggtaactggtgcaggcggctataacgacaagggcgaaaaagcc
ttagaggaccatattgtaagacgattccagaaggtgggcggattactcataagcacagac
gttctaagcgctggtcagaacctacaaaacgcccaatacgtagcaaactatgacttccca
tggaaccctgtagtactaatccagagagtaggccggatagatagaataggctcaaactac
gacatagtttatctaatcaacgtcttgcctagaaacggcgaccctgacgacccagagagc
ttggaacactttctagggctaatgcagagactatacaagcggctagagatgataagagga
accattggattggatgcgtcgacgcttggcgaggaggctgcgcctagggatttctcgata
caggccatgatagcgagaaacgacgaaagagtcctaaagatacttgagcagaaaatagaa
cagttcaccaaggacccaatagatattctagcaagaatacttaacgagaagggtttacag
tgggtcgagagaatccctaatggcataggggccataaagaggggcactttaaacggaatt
ttcgcgcttttaaccgatggtgacaatttttattggcggctccacgtgctagacaaggat
aaggagaagataatcacctccccgaccgaaatagtagacctcttgttagagggagagagt
gataacagaggagagaagctggagtatgataagctaatacctctcttggtcatggttaag
gaatcacttaagaaggagctcgaggaagtcatgaggagagaaaccacggcaatgggaccc
ccaagagtagataaaaaaacacgcaccgtattcgacgcgctgagccagctcggcgacgaa
ggtgagcggctagcctcgatgttccgcagagtagcttcaaaaccggcgatagttaaccat
ctctacagagcatatcttgaggggaagcttctagaggaggcgagaaaaatactgcccaaa
gcggtgcaggagatagcaacaaccaaccccgagacaaaggagctaagacgagtctgctgg
tgctacttcacaaaaacctga
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