Candidatus Caldarchaeum subterraneum: CSUB_C0054
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Entry
CSUB_C0054 CDS
T02904
Name
(GenBank) transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
csu
Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csu03000
]
CSUB_C0054
Transcription factors [BR:
csu03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CSUB_C0054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
Arc_trans_TRASH
MarR
TRASH_HVO_1752_C
HTH_20
HTH_11
AsnC_trans_reg_3
MarR_2
YHS
GntR
HTH_IclR
HTH_DeoR
DUF7342
zf-FCS
ATPase-cat_bd
Ta0938
Pfc11_Rna14-15-ID
Fe_dep_repress
PCI
Mga
Motif
Other DBs
NCBI-ProteinID:
BAJ49918
UniProt:
E6N470
LinkDB
All DBs
Position
complement(55855..56457)
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AA seq
200 aa
AA seq
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MELDQIDYRILSILQEDGRIPLSKLARKARVSVPTARQRVNRLVKEGVIQRFTILLNPKR
VTGYDIFIGISAKPADIGNVVEQLKNIEEVVGLYRTVGEHDLIVRLSVQSYAELDDFIAN
KLSTLNGIQGIRTNIVTNTIKDEPGPRLKPGAGIRVFCTICGKEIEGRPIKRTIEGREYY
LCCNSCAEIFDQKAPLGHVP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
ttggagctggaccaaatagactaccgaatactctccatacttcaggaggatggcagaata
cctctctctaagcttgcgcgtaaggcgagggtcagcgtcccaacggcgaggcagagggtt
aacaggcttgtgaaagaaggtgtgatacagcgtttcaccatactgctgaaccctaaacgc
gtaacgggctatgacatcttcatcggtataagcgccaaaccagccgacatcgggaatgtt
gtggagcagttgaaaaacatcgaggaagtggtgggactctaccgcaccgttggagagcac
gacctaattgtgaggctttcagtccagagctacgctgagctggacgacttcatagccaac
aaactctcaaccctcaacggcatacagggaataagaacaaacatcgtcacaaacaccatc
aaagacgagcccgggccaaggctaaagcccggagcaggcataagagtcttctgcacaata
tgcggcaaagaaatagaaggccgcccaataaagaggacaatagagggacgcgaatactat
ctatgctgcaactcatgcgcagaaatcttcgaccaaaaggcccccctcggacacgtccca
taa
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