Candidatus Caldarchaeum subterraneum: CSUB_C0169
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Entry
CSUB_C0169 CDS
T02904
Name
(GenBank) hypothetical protein
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
csu
Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csu03000
]
CSUB_C0169
Transcription factors [BR:
csu03000
]
Prokaryotic type
Helix-turn-helix
Other families
CSUB_C0169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TrmB
HTH_Cmi2_C
SMC_Nse1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BAJ50031
UniProt:
E6N4F8
LinkDB
All DBs
Position
complement(170788..171507)
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AA seq
239 aa
AA seq
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MEKLQKVFGFNKYQAKAYLAVLQGYSKPADVARKSKIPITRVYDVLSSLCENGFLTRTSD
GYRVTEPASAFTFWLERERARIESLMMEKKRMVEQIIPTVSRLRERGAVENEAAILRGLQ
PVVVKLREMVDSGTRFVFAVKKAVKLKEEFKKVVAAFPEKKFLFILHPSVQMGKDDYEFF
ESIGARVFFSEGVLLDVLVTDGGEAVIGLPLDDEPVVVWVRDRGFASSLMRSLEALASS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtggagaagctgcagaaggttttcggttttaacaagtatcaggcgaaggcctatttggcc
gtgttacagggatacagtaagcccgcggatgtggcgcgcaaatcaaagatacctattaca
cgtgtgtatgatgttttgtctagtttatgtgaaaacgggtttctcacaagaaccagcgac
ggataccgtgtcaccgagcccgcctctgccttcactttttggcttgaacgggagagggcg
agaattgagtctctgatgatggagaagaagagaatggtggagcaaattattccaaccgtc
tcgaggctaagggagcggggggctgttgagaacgaggcggctattctacggggtcttcaa
ccagttgtggttaagttgagggaaatggtggattcggggacgaggtttgttttcgcggtc
aaaaaagcggtgaagctgaaggaggagtttaaaaaagtggtggcagcttttcccgagaaa
aaatttctcttcatattgcatccctcggtgcagatgggtaaagatgattatgagtttttt
gagagtattggcgcgcgggtcttcttcagtgaaggggtgttgctggatgttttggtgacc
gatggaggtgaggctgttatagggctgcctctggacgatgagcccgtggtcgtctgggtg
cgggacaggggttttgcctcttctcttatgaggtctctggaggcccttgcctcgagctag
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