Candidatus Caldarchaeum subterraneum: CSUB_C0185
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Entry
CSUB_C0185 CDS
T02904
Name
(GenBank) conserved hypothetical protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
csu
Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csu03016
]
CSUB_C0185
Enzymes [BR:
csu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CSUB_C0185
Transfer RNA biogenesis [BR:
csu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CSUB_C0185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Motif
Other DBs
NCBI-ProteinID:
BAJ50046
UniProt:
E6N4J8
LinkDB
All DBs
Position
complement(183173..184492)
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AA seq
439 aa
AA seq
DB search
MDKLSTILDDVLLLLRSEALCDYCLGRQFARIHHEVSNREKGRILKIALLLDAVKRRDMD
TLFVLASNGGLDEAVKYVSEAGRSVEKRVCGLCHGVLDETVFRKAAEKAAELLHDIEFET
FLVGAKASGDVVNTEDRLRALAGLTEGENIRNEIKREISRVFANITGKKLDHSSPDVVIT
VDLFRDKVEAFPNPVFISGRYLKHSRELPQSPWHCKKCWGRGCQECGYTGRLYPTSVAEL
VGEPAKTLYQAADYKFHAAGREDVDALVEGEGRPFILELKRPRRRNIPLDQVQQHINTNT
QGLVTVYLEAYTTRRQVRQIKLAASTAAKTYLLKAVYDADLNPDKVKELETRFRNTVVEQ
LTPLRVLRRRAEKLRRKTVYSVEAELVDSRTALFRINCQGGLYVKELVTGDGGRTKPSFA
DVLGLVPIAMELTVLKVEA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
ttggataagttgtcgacgatattggacgatgttcttctgctgctgagaagcgaggccctc
tgcgactactgcctcggtcgacaattcgcacgcatacatcatgaggtaagcaacagggag
aaaggccggatactcaaaatcgccctgctcctcgacgcggttaagaggagagacatggat
acgctgtttgttctggcttccaacgggggattggatgaagcggtcaagtatgtctccgag
gctgggcggagtgttgagaagcgtgtctgcggcctttgccatggggtgttggatgagacg
gtgtttaggaaggcggcggaaaaagctgcggagttgctgcacgatatcgagtttgagacc
tttctcgtgggagcaaaggctagtggagatgtcgtcaacacagaggataggctacgtgct
ttggcggggttgactgagggcgagaacatcagaaatgagataaagcgggaaataagcagg
gttttcgcaaacatcaccgggaaaaaactcgaccacagctcaccagacgtcgtcataacc
gtggacctgttcagggacaaggtcgaagcatttcccaacccagtcttcatcagcgggcgc
tatcttaagcacagcagggaactgcctcagtcaccttggcactgtaaaaaatgctgggga
cgcggatgccaagagtgcggatacacagggcgtctttatccgaccagcgttgctgaactc
gtcggagaacctgccaaaacactgtatcaagccgctgactacaagtttcacgcggcggga
cgtgaagatgttgacgcgctggtagagggagagggccggcccttcatactggagttgaaa
cggccacggcgaagaaacatcccactagaccaagtgcagcagcacatcaacaccaacacc
caaggcctagtcacagtctatctagaagcctacactacacggcggcaagtcaggcagata
aagctagcagcctcaaccgctgcaaaaacctatctgctcaaagcagtttacgacgccgac
ctcaacccagacaaggtcaaggaattggagacacgttttagaaacacggttgtcgagcag
ctgaccccgttgagggtgctgcgacgccgcgccgagaagcttcgcagaaaaacagtctac
tcggtggaggctgagctcgtcgacagcagaaccgcgttattcaggataaactgccaagga
ggattgtatgtcaaagagcttgtcacaggtgacggcggccgcaccaaaccaagcttcgcc
gacgtattgggacttgtccccatagccatggagctaacagtgttaaaggtcgaggcgtaa
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