Candidatus Caldarchaeum subterraneum: CSUB_C0234
Help
Entry
CSUB_C0234 CDS
T02904
Name
(GenBank) branched-chain amino acid ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
csu
Candidatus Caldarchaeum subterraneum
Pathway
csu02010
ABC transporters
csu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CSUB_C0234
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CSUB_C0234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csu02000
]
CSUB_C0234
Transporters [BR:
csu02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
CSUB_C0234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Rad17
AAA_30
AAA_19
AAA_16
AAA_29
ABC_ATPase
DLIC
Mg_chelatase
AAA_23
AAA_22
SMC_N
NACHT
SRP54
PIF1
AAA_14
cobW
AAA_25
ATPase_2
TsaE
DO-GTPase2
AAA_27
AAA_24
NB-ARC
AAA_15
AAA
ATP-synt_ab
RsgA_GTPase
T2SSE
nSTAND3
AAA_28
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
BAJ50095
UniProt:
E6N4M0
LinkDB
All DBs
Position
complement(234944..235663)
Genome browser
AA seq
239 aa
AA seq
DB search
MPSLLQLEGLDSGYGDIQVLWNVSLTVEKGEVVAVLGPNGAGKTTLLKTIAGIIKPKKGK
VLLEGKRIDGQPPEKIVEEGVALALAEKELFPLMTVHENLLLGAFNKRARQKLDENLEMV
YSIFPKLKERASQKAGTMSGGEQQMLAIGRALMTDSKLLLLDEPSTGLAPLLVKTIFQAL
RKLMETKRELSILLVEQRTVQAAQLSDRGYVLSNGRIVYEGDIKEAVYSRTFLRKYMGM
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
ttgccgagccttcttcagcttgagggcttggactcgggatacggcgacatacaggttctc
tggaatgtttcgctgactgtggagaagggcgaggtggtggcggtgcttggccccaacgga
gcaggcaaaaccactctgctaaaaacaatcgcgggaatcataaaacccaagaaaggaaaa
gttctgcttgaagggaaaaggattgacggccagcctccggagaaaattgtcgaagaaggt
gtggctcttgccttagctgagaaagagcttttcccgctgatgactgttcacgaaaacctc
ttactcggcgccttcaacaaacgggcccgccaaaaattagacgaaaaccttgaaatggtt
tacagcatcttccctaagctgaaggagcgggcgtctcagaaggctggcaccatgagcgga
ggcgagcagcagatgcttgccataggaagagcactgatgacggactcgaagctacttcta
ttggacgaaccatcaacagggctggcaccactcctcgtgaaaaccatcttccaagcattg
agaaaactcatggagactaagagagagctctccatactacttgtagagcagcggaccgtg
caggctgctcagctcagcgacagaggctatgtgttatcaaacgggcgcatcgtgtatgaa
ggcgacatcaaggaagccgtatactctaggacttttctgagaaaatacatggggatgtag
DBGET
integrated database retrieval system
