Candidatus Caldarchaeum subterraneum: CSUB_C0485
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Entry
CSUB_C0485 CDS
T02904
Name
(GenBank) conserved hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csu
Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csu03016
]
CSUB_C0485
Enzymes [BR:
csu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CSUB_C0485
Transfer RNA biogenesis [BR:
csu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CSUB_C0485
Prokaryotic type
CSUB_C0485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
PUA
TruB_N
UPF0113
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BAJ50346
UniProt:
E6N5G1
LinkDB
All DBs
Position
451270..451992
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AA seq
240 aa
AA seq
DB search
MFMHGGKEYVGLMELHGDVSDDKLLEAFKIFTGDVYQVPPVRASVARRPRIRRVYYFDLL
ERDGRYILFRIGCSGGTYVRKICHDMGLYLGVGAHMEELRRTRAGSLEEKNSVTLLQVYE
AFEKYRETGDEEAVRKVVYPVEKCLELLPKVYILDTAVDAVCHGADLMVAGVSMIDSDVA
ENSEVAVMTLKNELVALGKAAMDAQSILEASEGMAVDVTRVIMHKSTYPPVWKGGLQRVQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgttcatgcatgggggcaaggaatatgtcgggttgatggagcttcatggcgacgtctct
gacgataagctgctggaagccttcaaaatcttcacgggagacgtttaccaagttcctccg
gtgagggcctctgtagcgagaaggccgaggattaggcgtgtctactattttgatttgctt
gagagagacggtcgctacatcttattcagaatagggtgctcaggcggaacctacgtcaga
aaaatctgtcatgacatggggctctacctcggggtcggcgcacacatggaagagcttaga
agaacgagagcaggctcgctggaggagaaaaacagcgtaacacttctgcaggtctacgaa
gcctttgaaaaatacagagaaacaggggacgaagaggcggtgcgtaaagtagtgtatcct
gttgagaaatgtctggagcttttgcccaaggtctacattctggatacggcagttgacgcc
gtatgccatggcgccgacttgatggtggcaggtgtctcgatgattgactccgacgttgcg
gaaaacagcgaagtggctgtgatgactttgaagaacgagctggtggctctcgggaaagcc
gcgatggatgcacaatcaatcctagaagcatccgaaggaatggccgttgacgtaacacga
gtcatcatgcacaagtccacttatccaccagtctggaaaggaggtctacagcgtgtccaa
taa
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integrated database retrieval system
